CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000002568
(
Latimeria chalumnae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLACG00000002568
T096957_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PLAG1
M06465_2.00
Homo sapiens
CCCCCKWDGGCCCC
GGGGCCHWMGGGGG
B1H
Mathelier et al.(2014)
MA0163.1
0.817
0.975
PLAG1
M10286_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_01
0.817
0.975
PLAG1
M10287_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_02
0.817
0.975
PLAG1
M10288_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAG1_08
0.817
0.975
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000002874
C2H2 ZF
36
58
FPCQLCDKAFNSVEKLKVHSYSH
ENSLACP00000002874
C2H2 ZF
64
88
YKCTQPDCTKAFVSKYKLLRHMATH
ENSLACP00000002874
C2H2 ZF
94
116
HKCNYCEKMFHRKDHLKNHLHTH
ENSLACP00000002874
C2H2 ZF
123
145
FKCEECGKNYNTKLGFKRHLALH
ENSLACP00000002874
C2H2 ZF
152
174
LTCKVCMQTFESTGVLLEHLKTH
ENSLACP00000002874
C2H2 ZF
187
209
HQCEHCDRRFYTRKDVRRHMVVH
ENSLACP00000002874
C2H2 ZF
215
238
FLCQYCAQRFGRKDHLTRHMKKSH
Links
Other
C2H2 ZF
family TFs
Other
Latimeria chalumnae
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy