ENSLACG00000002734 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000002734 T096958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN

NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.817 0.993
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN

NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.817 0.993
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT

AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.796 0.899
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT

AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.796 0.899
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN

NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.796 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000003055 C2H2 ZF 257 279
ENSLACP00000003055 C2H2 ZF 285 307
ENSLACP00000003055 C2H2 ZF 313 335
ENSLACP00000003055 C2H2 ZF 341 363
ENSLACP00000003055 C2H2 ZF 369 391
ENSLACP00000003055 C2H2 ZF 397 420

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

Invalid Input OrderBy

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action