ENSLACG00000006434 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000006434 T097013_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SP2
M04525_2.00
Homo sapiens
NYWAGYCCCGCCCMCYH

DRGKGGGCGGGRCTWRN
SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX
0.807 0.957
SP2
M08326_2.00
Homo sapiens
YCCCGCCCM

KGGGCGGGR
ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE
0.807 0.957
SP2
M08092_2.00
Homo sapiens
BYCCCGCCYCYBNNB

VNNVRGRGGCGGGRV
ChIP-seq
Mathelier et al.(2014)
MA0516.1
0.807 0.957
SP2
M07932_2.00
Homo sapiens
KSCTAGAGMGGCBVB

VBVGCCKCTCTAGSM
ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha
0.807 0.957
SP2
M08911_2.00
Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A
0.807 0.957
Sp2
M08970_2.00
Mus musculus
SBBSNVSBCCCGCCYCYBBBBS

SVVVVRGRGGCGGGVSBNSVVS
Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B
0.807 0.957
SP2
M10250_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_01
0.807 0.957
SP2
M10251_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_04
0.807 0.957
SP2
M10252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_06
0.807 0.957
SP2
M10253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3_01
0.807 0.957
SP2
M10254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SP2_Q3
0.807 0.957
SP2
M04526_2.00
Homo sapiens
NTWAGYCCCGCCCMCTT

AAGKGGGCGGGRCTWAN
SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX
0.807 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000007255 C2H2 ZF 516 540
ENSLACP00000007255 C2H2 ZF 546 570
ENSLACP00000007255 C2H2 ZF 576 598

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_043000 Aspergillus clavatus CADACLAG00004293 N 0.000
AFUA_8G02710 Aspergillus fumigatus CADAFUAG00001018 N 0.000
ANIA_08885 Aspergillus nidulans CADANIAG00007984 N 0.000
ATEG_10383 Aspergillus terreus CADATEAG00001854 N 0.000
BATDEDRAFT_28286 Batrachochytrium dendrobatidis BATDEDRAFT_28286 N 0.000
BAUCODRAFT_47223 Baudoinia compniacensis BAUCODRAFT_47223 I 0.000
BOTBODRAFT_138635 Botryobasidium botryosum BOTBODRAFT_138635 N 0.000
CADAFLAG00012828 Aspergillus flavus CADAFLAG00012828 N 0.000
CADAORAG00004794 Aspergillus oryzae CADAORAG00004794 N 0.000
CERSUDRAFT_119740 Ceriporiopsis subvermispora CERSUDRAFT_119740 N 0.000
DACRYDRAFT_114226 Dacryopinax sp DACRYDRAFT_114226 I 0.000
E5Q_05532 Mixia osmundae E5Q_05532 N 0.000
estExt_fgenesh3_kg.C_170048 Heterobasidion annosum estExt_fgenesh3_kg.C_170048 N 0.000
estExt_fgeneshMC_pg.C_50901 Mucor circinelloides estExt_fgeneshMC_pg.C_50901 N 0.000
EURHEDRAFT_459391 Aspergillus ruber EURHEDRAFT_459391 N 0.000
FIBRA_02145 Fibroporia radiculosa FIBRA_02145 N 0.000
GLOTRDRAFT_117339 Gloeophyllum trabeum GLOTRDRAFT_117339 N 0.000
GLOTRDRAFT_62199 Gloeophyllum trabeum GLOTRDRAFT_62199 N 0.000
HETIRDRAFT_439816 Heterobasidion irregulare HETIRDRAFT_439816 N 0.000
HYDPIDRAFT_117261 Hydnomerulius pinastri HYDPIDRAFT_117261 N 0.000
K443DRAFT_683893 Laccaria amethystina K443DRAFT_683893 N 0.000
LACBIDRAFT_296682 Laccaria bicolor LACBIDRAFT_296682 I 0.000
LACBIDRAFT_296690 Laccaria bicolor LACBIDRAFT_296690 N 0.000
LACBIDRAFT_317921 Laccaria bicolor LACBIDRAFT_317921 I 0.000
M378DRAFT_163769 Amanita muscaria M378DRAFT_163769 N 0.000
M413DRAFT_412939 Hebeloma cylindrosporum M413DRAFT_412939 N 0.000
PAXINDRAFT_169439 Paxillus involutus PAXINDRAFT_169439 N 0.000
PAXINDRAFT_172061 Paxillus involutus PAXINDRAFT_172061 N 0.000
PAXINDRAFT_31743 Paxillus involutus PAXINDRAFT_31743 I 0.000
PAXINDRAFT_78504 Paxillus involutus PAXINDRAFT_78504 N 0.000
Pc16g00930 Penicillium chrysogenum Pc16g00930 N 0.000
PCH_Pc16g00930 Penicillium rubens PCH_Pc16g00930 N 0.000
PDE_06878 Penicillium oxalicum PDE_06878 N 0.000
PEX1_105370 Penicillium expansum PEX1_105370 N 0.000
PILCRDRAFT_789690 Piloderma croceum PILCRDRAFT_789690 N 0.000
PITC_009530 Penicillium italicum PITC_009530 N 0.000
PLICRDRAFT_57185 Plicaturopsis crispa PLICRDRAFT_57185 N 0.000
PMAA_060820 Talaromyces marneffei PMAA_060820 N 0.000
PMAA_060820 Penicillium marneffei PMAA_060820 N 0.000
PV06_01512 Exophiala oligosperma PV06_01512 N 0.000
PV09_00718 Verruconis gallopava PV09_00718 N 0.000
PVAR5_8290 Byssochlamys spectabilis PVAR5_8290 N 0.000
SCHCODRAFT_269951 Schizophyllum commune SCHCODRAFT_269951 N 0.000
SPBC530.08 Schizosaccharomyces pombe SPBC530.08 N 0.000
U727_00431840181 Penicillium solitum U727_00431840181 N 0.000
W97_02786 Coniosporium apollinis W97_02786 I 0.000
WALSEDRAFT_58028 Wallemia sebi WALSEDRAFT_58028 N 0.000