ENSLACG00000007028 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000007028 T097023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hic1
M00141_2.00
Mus musculus
RTGCCMNBN

NVNKGGCAY
PBM
Badis et al.(2009)
Hic1_2816
0.823 0.965
Hic1
M02933_2.00
Mus musculus
RTGCCAVCYBRTGCCAVC

GBTGGCAYVRGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_1
0.823 0.965
Hic1
M02934_2.00
Mus musculus
RTGCCAVCN

NGBTGGCAY
SELEX
Jolma et al.(2013)
Hic1_2
0.823 0.965
Hic1
M09003_2.00
Mus musculus
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_MOUSE.H11MO.0.C
0.823 0.965
HIC2
M02902_2.00
Homo sapiens
RTGCCMVNN

NNBKGGCAY
SELEX
Jolma et al.(2013)
HIC2_1
0.797 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000007941 C2H2 ZF 411 433
ENSLACP00000007941 C2H2 ZF 465 487
ENSLACP00000007941 C2H2 ZF 493 515
ENSLACP00000007941 C2H2 ZF 521 543
ENSLACP00000007941 C2H2 ZF 549 571

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003503 Calypte anna Aan_R003503 I 0.825
Aan_R008211 Calypte anna Aan_R008211 I 0.795
Afo_R001109 Aptenodytes forsteri Afo_R001109 I 0.795
Afo_R013473 Aptenodytes forsteri Afo_R013473 I 0.825
Alligator_sinensis_CCG008952.1 Alligator sinensis Alligator_sinensis_CCG008952.1 I 0.823
Alligator_sinensis_CCG015471.1 Alligator sinensis Alligator_sinensis_CCG015471.1 I 0.795
Brh_R005582 Buceros rhinoceros Brh_R005582 I 0.795
Cmyd_10017824 Chelonia mydas Cmyd_10017824 I 0.795
ENSAPLG00000002158 Anas platyrhynchos ENSAPLG00000002158 I 0.795
ENSCSAG00000013356 Chlorocebus sabaeus ENSCSAG00000013356 I 0.797
ENSFALG00000006543 Ficedula albicollis ENSFALG00000006543 I 0.825
ENSFALG00000014495 Ficedula albicollis ENSFALG00000014495 I 0.795
ENSGALG00000001403 Gallus gallus ENSGALG00000001403 I 0.795
ENSGALG00000026718 Gallus gallus ENSGALG00000026718 I 0.825
ENSLOCG00000002169 Lepisosteus oculatus ENSLOCG00000002169 I 0.795
ENSMGAG00000005397 Meleagris gallopavo ENSMGAG00000005397 I 0.825
ENSMPUG00000003198 Mustela putorius furo ENSMPUG00000003198 I 0.797
ENSONIG00000014335 Oreochromis niloticus ENSONIG00000014335 I 0.789
ENSP00000384889 Macaca fascicularis ENSP00000384889 I 0.797
ENSPANG00000024301 Papio anubis ENSPANG00000024301 I 0.797
ENSPFOG00000020465 Poecilia formosa ENSPFOG00000020465 I 0.789
ENSPPYG00000012022 Pongo abelii ENSPPYG00000012022 I 0.797
ENSPSIG00000000839 Pelodiscus sinensis ENSPSIG00000000839 I 0.795
ENSPSIG00000000992 Pelodiscus sinensis ENSPSIG00000000992 I 0.795
ENSPSIG00000007902 Pelodiscus sinensis ENSPSIG00000007902 I 0.825
ENSSSCG00000021196 Sus scrofa ENSSSCG00000021196 I 0.797
ENSSTOG00000006360 Ictidomys tridecemlineatus ENSSTOG00000006360 I 0.797
ENSXMAG00000020311 Xiphophorus maculatus ENSXMAG00000020311 I 0.789
Gfo_R010813 Geospiza fortis Gfo_R010813 I 0.795
hic1 Takifugu rubripes ENSTRUG00000004590 I 0.821
HIC1 Taeniopygia guttata ENSTGUG00000005835 I 0.825
hic1 Gasterosteus aculeatus ENSGACG00000010848 I 0.821
hic1 Oryzias latipes ENSORLG00000004895 I 0.818
HIC1 Anolis carolinensis ENSACAG00000011777 I 0.769
HIC1 Cavia porcellus ENSCPOG00000020382 I 0.823
Hic1 Mus musculus ENSMUSG00000043099 D 0.823
hic1l Gasterosteus aculeatus ENSGACG00000004268 I 0.789
hic1l Takifugu rubripes ENSTRUG00000013139 I 0.789
HIC2 Pteropus vampyrus ENSPVAG00000000111 I 0.797
HIC2 Equus caballus ENSECAG00000017997 I 0.797
HIC2 Oryctolagus cuniculus ENSOCUG00000010516 I 0.797
HIC2 Cavia porcellus ENSCPOG00000001134 I 0.797
HIC2 Canis familiaris ENSCAFG00000032493 I 0.797
HIC2 Bos taurus ENSBTAG00000005951 I 0.783
HIC2 Procavia capensis ENSPCAG00000015907 I 0.797
HIC2 Otolemur garnettii ENSOGAG00000030274 I 0.797
hic2 Xenopus tropicalis XB-GENE-960044 I 0.794
HIC2 Felis catus ENSFCAG00000023903 I 0.797
HIC2 Homo sapiens ENSG00000169635 D 0.797
Hic2 Mus musculus ENSMUSG00000050240 I 0.797
Hic2 Rattus norvegicus ENSRNOG00000051458 I 0.797
HIC2 Myotis lucifugus ENSMLUG00000009669 I 0.797
HIC2 Microcebus murinus ENSMICG00000005154 I 0.795
HIC2 Meleagris gallopavo ENSMGAG00000000949 I 0.795
HIC2 Taeniopygia guttata ENSTGUG00000008699 I 0.795
HIC2 Gorilla gorilla ENSGGOG00000006041 I 0.797
HIC2 Pan troglodytes ENSPTRG00000014112 I 0.797
HIC2 Dasypus novemcinctus ENSDNOG00000003162 I 0.797
Myotis_brandtii_HIC2_10021802 Myotis brandtii Myotis_brandtii_HIC2_10021802 I 0.797
Ogr08090 Ophisaurus gracilis Ogr08090 I 0.795
Pvit_18806 Pogona vitticeps Pvit_18806 I 0.795
Tal_R003180 Tyto alba Tal_R003180 I 0.795
XP_002937184 Xenopus tropicalis XP_002937184 I 0.825