CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000010241
(
Latimeria chalumnae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLACG00000010241
T097063_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ikzf1
M08969_2.00
Mus musculus
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C
0.761
0.935
IKZF1
M08939_2.00
Homo sapiens
HYTCCCAV
BTGGGARD
Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C
0.761
0.924
IKZF1
M10301_2.00
Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN
Transfac
Matys et al.(2006)
V$IK1_01
0.761
0.924
IKZF1
M10302_2.00
Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV
Transfac
Matys et al.(2006)
V$IK2_01
0.761
0.924
IKZF1
M10303_2.00
Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM
Transfac
Matys et al.(2006)
V$IK3_01
0.761
0.924
IKZF1
M10304_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5_01
0.761
0.924
IKZF1
M10305_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IK_Q5
0.761
0.924
IKZF1
M10306_2.00
Homo sapiens
YYTCCCARA
TYTGGGARR
Transfac
Matys et al.(2006)
V$LYF1_01
0.761
0.924
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000011637
C2H2 ZF
112
134
LKCDICGMVCIGPNVLMVHKRSH
ENSLACP00000011637
C2H2 ZF
140
162
FQCNQCGASFTQKGNLLRHIKLH
ENSLACP00000011637
C2H2 ZF
168
190
FKCPFCNYACRRRDALTGHLRTH
ENSLACP00000011637
C2H2 ZF
201
224
YKCNYCGRSYKQRTSLEEHKERCH
Links
Other
C2H2 ZF
family TFs
Other
Latimeria chalumnae
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy