ENSLACG00000014572 (Latimeria chalumnae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLACG00000014572 T097122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp281
M00139_2.00
Mus musculus
NHDCCCCCHH

DDGGGGGHDN
PBM
Badis et al.(2009)
Zfp281_0973
0.810 0.912
ZNF281
M04509_2.00
Homo sapiens
SCCCCTCCCCCM

KGGGGGAGGGGS
SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX
0.810 0.912
ZNF281
M08321_2.00
Homo sapiens
BNCCCCTCCCCC

GGGGGAGGGGNV
ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE
0.810 0.912
Zfp281
M08025_2.00
Mus musculus
CCCCWCCCCCMVCHB

VDGBKGGGGGWGGGG
ChIP-seq
Chen et al.(2011)
GSE11329_zfp281
0.810 0.912
ZNF281
M08906_2.00
Homo sapiens
BCCCCTCCCCCHNYN

NRNDGGGGGAGGGGV
Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A
0.810 0.912
Zfp281
M08999_2.00
Mus musculus
CCCCTCCCCCMMCBB

VVGKKGGGGGAGGGG
Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A
0.810 0.912
ZNF281
M10237_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP281_01
0.810 0.912
ZNF281
M04510_2.00
Homo sapiens
RCCCMTCCCCCR

YGGGGGAKGGGY
SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX
0.810 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000016537 C2H2 ZF 177 199
ENSLACP00000016537 C2H2 ZF 205 227
ENSLACP00000016537 C2H2 ZF 233 255
ENSLACP00000016537 C2H2 ZF 261 282
ENSLACP00000016538 C2H2 ZF 197 219
ENSLACP00000016538 C2H2 ZF 225 247
ENSLACP00000016538 C2H2 ZF 253 275
ENSLACP00000016538 C2H2 ZF 281 302

Links

Other C2H2 ZF family TFs
Other Latimeria chalumnae TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R014758 Calypte anna Aan_R014758 I 0.801
Afo_R004007 Aptenodytes forsteri Afo_R004007 I 0.801
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I 0.801
Brh_R005182 Buceros rhinoceros Brh_R005182 I 0.801
Cmyd_10021057 Chelonia mydas Cmyd_10021057 I 0.801
ENSAMXG00000006043 Astyanax mexicanus ENSAMXG00000006043 I 0.759
ENSAMXG00000006245 Astyanax mexicanus ENSAMXG00000006245 I 0.801
ENSAMXG00000015147 Astyanax mexicanus ENSAMXG00000015147 I 0.798
ENSCSAG00000000250 Chlorocebus sabaeus ENSCSAG00000000250 I 0.810
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I 0.801
ENSGMOG00000001704 Gadus morhua ENSGMOG00000001704 I 0.801
ENSGMOG00000008854 Gadus morhua ENSGMOG00000008854 I 0.789
ENSLACG00000006364 Latimeria chalumnae ENSLACG00000006364 I 0.759
ENSLOCG00000011584 Lepisosteus oculatus ENSLOCG00000011584 I 0.793
ENSMEUG00000011709 Macropus eugenii ENSMEUG00000011709 I 0.813
ENSMPUG00000019246 Mustela putorius furo ENSMPUG00000019246 I 0.810
ENSNLEG00000018067 Nomascus leucogenys ENSNLEG00000018067 I 0.810
ENSONIG00000000839 Oreochromis niloticus ENSONIG00000000839 I 0.774
ENSONIG00000016453 Oreochromis niloticus ENSONIG00000016453 I 0.789
ENSP00000356322 Macaca fascicularis ENSP00000356322 I 0.810
ENSP00000356322-D1 Bos grunniens ENSP00000356322-D1 I 0.784
ENSPANG00000017386 Papio anubis ENSPANG00000017386 I 0.810
ENSPFOG00000000851 Poecilia formosa ENSPFOG00000000851 I 0.789
ENSPFOG00000008024 Poecilia formosa ENSPFOG00000008024 I 0.789
ENSTSYG00000007604 Tarsius syrichta ENSTSYG00000007604 I 0.810
Gfo_R006633 Geospiza fortis Gfo_R006633 I 0.801
Ogr00130 Ophisaurus gracilis Ogr00130 I 0.801
Pvit_03082 Pogona vitticeps Pvit_03082 I 0.759
Pvit_14619 Pogona vitticeps Pvit_14619 I 0.798
Tal_R010113 Tyto alba Tal_R010113 I 0.801
Zfp281 Rattus norvegicus ENSRNOG00000058643 I 0.810
Zfp281 Mus musculus ENSMUSG00000041483 D 0.810
Zfp281 Dipodomys ordii ENSDORG00000002833 I 0.808
znf148 Danio rerio ENSDARG00000055106 I 0.757
znf148 Oryzias latipes ENSORLG00000015950 I 0.757
ZNF148 Anolis carolinensis ENSACAG00000010047 I 0.759
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I 0.801
ZNF281 Sus scrofa ENSSSCG00000010911 I 0.810
ZNF281 Tursiops truncatus ENSTTRG00000004326 I 0.810
znf281 Xenopus tropicalis XB-GENE-5933312 I 0.813
ZNF281 Pan troglodytes ENSPTRG00000015318 I 0.810
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I 0.789
ZNF281 Gorilla gorilla ENSGGOG00000010349 I 0.810
ZNF281 Homo sapiens ENSG00000162702 D 0.810
ZNF281 Erinaceus europaeus ENSEEUG00000011443 I 0.810
ZNF281 Equus caballus ENSECAG00000024354 I 0.810
ZNF281 Dasypus novemcinctus ENSDNOG00000016981 I 0.810
ZNF281 Callithrix jacchus ENSCJAG00000005104 I 0.810
ZNF281 Choloepus hoffmanni ENSCHOG00000004074 I 0.810
ZNF281 Anolis carolinensis ENSACAG00000006286 I 0.798
ZNF281 Microcebus murinus ENSMICG00000001070 I 0.810
ZNF281 Macaca mulatta ENSMMUG00000007334 I 0.810
ZNF281 Felis catus ENSFCAG00000028447 I 0.810
ZNF281 Monodelphis domestica ENSMODG00000012840 I 0.813
ZNF281 Otolemur garnettii ENSOGAG00000010366 I 0.810
ZNF281 Oryctolagus cuniculus ENSOCUG00000010120 I 0.810
znf281a Oryzias latipes ENSORLG00000002799 I 0.786
znf281a Takifugu rubripes ENSTRUG00000016619 I 0.789
znf281a Tetraodon nigroviridis ENSTNIG00000016430 I 0.777
znf281a Danio rerio ENSDARG00000000567 I 0.798
znf281a Gasterosteus aculeatus ENSGACG00000009536 I 0.786
znf281b Tetraodon nigroviridis ENSTNIG00000018917 I 0.789
znf281b Danio rerio ENSDARG00000035910 I 0.801
znf281b Gasterosteus aculeatus ENSGACG00000006858 I 0.789
znf281b Oryzias latipes ENSORLG00000005292 I 0.789
znf281b Takifugu rubripes ENSTRUG00000008207 I 0.789