PRDM6 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000000396 T097196_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000000335 C2H2 ZF 437 458
ENSLAFP00000000335 C2H2 ZF 465 487
ENSLAFP00000000335 C2H2 ZF 493 515
ENSLAFP00000000335 C2H2 ZF 521 542
ENSLAFP00000021823 C2H2 ZF 469 490
ENSLAFP00000021823 C2H2 ZF 497 519
ENSLAFP00000021823 C2H2 ZF 525 547
ENSLAFP00000021823 C2H2 ZF 553 574

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

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52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action