PATZ1 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000002317 T097221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC

GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.804 0.993
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY

RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.804 0.993
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH

DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.804 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000001936 C2H2 ZF 292 314
ENSLAFP00000001936 C2H2 ZF 356 377
ENSLAFP00000001936 C2H2 ZF 383 405
ENSLAFP00000001936 C2H2 ZF 413 436
ENSLAFP00000001936 C2H2 ZF 442 464
ENSLAFP00000001936 C2H2 ZF 496 518
ENSLAFP00000029452 C2H2 ZF 279 301
ENSLAFP00000029452 C2H2 ZF 343 364
ENSLAFP00000029452 C2H2 ZF 370 392
ENSLAFP00000029452 C2H2 ZF 400 423
ENSLAFP00000029452 C2H2 ZF 429 451
ENSLAFP00000029452 C2H2 ZF 483 505

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PATZ1 Ornithorhynchus anatinus ENSOANG00000014654 I 0.804
PATZ1 Otolemur garnettii ENSOGAG00000027905 I 0.804
ENSAMEG00000007074 Ailuropoda melanoleuca ENSAMEG00000007074 I 0.804
PATZ1 Macaca mulatta ENSMMUG00000013911 I 0.804
Patz1 Mus musculus ENSMUSG00000020453 I 0.804
ENSPPYG00000011732 Pongo abelii ENSPPYG00000011732 I 0.804
PATZ1 Pan troglodytes ENSPTRG00000014268 I 0.804
ENSP00000266269 Macaca fascicularis ENSP00000266269 I 0.804
Myotis_brandtii_PATZ1_10027570 Myotis brandtii Myotis_brandtii_PATZ1_10027570 I 0.804
ENSP00000266269-D1 Bos grunniens ENSP00000266269-D1 I 0.804
PATZ1 Tursiops truncatus ENSTTRG00000010279 I 0.804
PATZ1 Pteropus vampyrus ENSPVAG00000001749 I 0.804
ENSSTOG00000020707 Ictidomys tridecemlineatus ENSSTOG00000020707 I 0.804
PATZ1 Myotis lucifugus ENSMLUG00000009942 I 0.804
ENSNLEG00000004385 Nomascus leucogenys ENSNLEG00000004385 I 0.804
PATZ1 Microcebus murinus ENSMICG00000005430 I 0.804
PATZ1 Cavia porcellus ENSCPOG00000010787 I 0.804
PATZ1 Canis familiaris ENSCAFG00000013087 I 0.804
PATZ1 Bos taurus ENSBTAG00000005478 I 0.804
PATZ1 Homo sapiens ENSG00000100105 D 0.804
PATZ1 Dasypus novemcinctus ENSDNOG00000003183 I 0.804
PATZ1 Gorilla gorilla ENSGGOG00000017171 I 0.804
Gfo_R010882 Geospiza fortis Gfo_R010882 I 0.802
Brh_R010628 Buceros rhinoceros Brh_R010628 I 0.802
ENSAPLG00000003934 Anas platyrhynchos ENSAPLG00000003934 I 0.802
Tal_R008892 Tyto alba Tal_R008892 I 0.802
Pvit_03702 Pogona vitticeps Pvit_03702 I 0.802
ENSPSIG00000011562 Pelodiscus sinensis ENSPSIG00000011562 I 0.802
Afo_R009044 Aptenodytes forsteri Afo_R009044 I 0.802
ENSFALG00000007450 Ficedula albicollis ENSFALG00000007450 I 0.802
ENSPSIG00000016553 Pelodiscus sinensis ENSPSIG00000016553 I 0.802
Aan_R008287 Calypte anna Aan_R008287 I 0.802
PATZ1 Meleagris gallopavo ENSMGAG00000008439 I 0.801
PATZ1 Gallus gallus ENSGALG00000006934 I 0.801
ENSLACG00000016839 Latimeria chalumnae ENSLACG00000016839 I 0.769
ENSMEUG00000016293 Macropus eugenii ENSMEUG00000016293 I 0.766