PATZ1 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000002317 T097221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.804 0.993
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.804 0.993
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.804 0.993
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000001936 C2H2 ZF 292 314
ENSLAFP00000001936 C2H2 ZF 356 377
ENSLAFP00000001936 C2H2 ZF 383 405
ENSLAFP00000001936 C2H2 ZF 413 436
ENSLAFP00000001936 C2H2 ZF 442 464
ENSLAFP00000001936 C2H2 ZF 496 518
ENSLAFP00000029452 C2H2 ZF 279 301
ENSLAFP00000029452 C2H2 ZF 343 364
ENSLAFP00000029452 C2H2 ZF 370 392
ENSLAFP00000029452 C2H2 ZF 400 423
ENSLAFP00000029452 C2H2 ZF 429 451
ENSLAFP00000029452 C2H2 ZF 483 505

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

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37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action