CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000002909
T097228_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.811
0.967
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.811
0.967
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.811
0.967
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.772
0.920
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000002429
C2H2 ZF
117
139
YKCNICEKTFTNNSSLRKHLKNH
ENSLAFP00000002429
C2H2 ZF
145
167
FKCKECLKAFSQSSALIQHQITH
ENSLAFP00000002429
C2H2 ZF
173
195
YVCKECGKAFTLSTSLYKHLRTH
ENSLAFP00000002429
C2H2 ZF
201
223
YRCKECGKSFSRRSGLFIHQKVH
ENSLAFP00000002429
C2H2 ZF
252
274
YLCNECGNTFKSSSSLRYHQRIH
ENSLAFP00000002429
C2H2 ZF
280
302
FKCSECGRAFSQSASLIQHERIH
ENSLAFP00000002429
C2H2 ZF
308
330
YRCNECGKGFTSISRLNRHRIIH
ENSLAFP00000002429
C2H2 ZF
336
358
YNCNECGKALSSHSTLIIHERIH
ENSLAFP00000002429
C2H2 ZF
364
386
CKCKVCGKAFRQSSALIQHQRMH
ENSLAFP00000002429
C2H2 ZF
392
414
YKCNECGKTFRCNSSLSNHQRIH
ENSLAFP00000002429
C2H2 ZF
420
442
YRCEECGISFGQSSALIQHRRIH
ENSLAFP00000002429
C2H2 ZF
448
470
FECNTCGKTFRQSSSRIAHQRIH
ENSLAFP00000002429
C2H2 ZF
476
498
YECNTCGKLFNHRSSLTNHYKTH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy