CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP1
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000003125
T097232_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.824
0.984
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.824
0.984
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.824
0.984
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.824
0.984
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.824
0.984
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.806
0.957
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.806
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000002599
C2H2 ZF
180
202
FICNYCDKTFSFKSLLISHKRIH
ENSLAFP00000002599
C2H2 ZF
208
230
YECNVCKKTFSHKANLIKHQRIH
ENSLAFP00000002599
C2H2 ZF
236
258
FECPECGKAFTHQSNLIVHQRAH
ENSLAFP00000002599
C2H2 ZF
264
286
YECSDCGKTFAQKFELTTHQRIH
ENSLAFP00000002599
C2H2 ZF
292
314
YECNECAKTFFKKSNLIIHQKIH
ENSLAFP00000002599
C2H2 ZF
320
342
YECSECGKSFIQNSQLIIHMRTH
ENSLAFP00000002599
C2H2 ZF
348
370
YECTECGKTFSQRSTLRLHLRIH
ENSLAFP00000002599
C2H2 ZF
376
398
YECSECGKAFSRKSRLSVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy