SNAI3 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000005117 T097260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI3
M04607_2.00 		Homo sapiens
YRCACCTGYH
DRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX 		0.761 0.851
SNAI3
M04608_2.00 		Homo sapiens
YVCACCTGYH
DRCAGGTGBR		 SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX 		0.761 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000004282 C2H2 ZF 151 173
ENSLAFP00000004282 C2H2 ZF 182 204
ENSLAFP00000004282 C2H2 ZF 208 230
ENSLAFP00000004282 C2H2 ZF 236 258
ENSLAFP00000004282 C2H2 ZF 264 285
ENSLAFP00000024221 C2H2 ZF 130 152
ENSLAFP00000024221 C2H2 ZF 161 183
ENSLAFP00000024221 C2H2 ZF 187 209
ENSLAFP00000024221 C2H2 ZF 215 237
ENSLAFP00000024221 C2H2 ZF 243 264

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SNAI3 Otolemur garnettii ENSOGAG00000000419 I 0.794
ENSSTOG00000021205 Ictidomys tridecemlineatus ENSSTOG00000021205 I 0.781
ENSAMEG00000018165 Ailuropoda melanoleuca ENSAMEG00000018165 I 0.778
SNAI3 Pteropus vampyrus ENSPVAG00000017357 I 0.775
ENSNLEG00000000595 Nomascus leucogenys ENSNLEG00000000595 I 0.770
SNAI3 Callithrix jacchus ENSCJAG00000012922 I 0.768
ENSMPUG00000008104 Mustela putorius furo ENSMPUG00000008104 N 0.767
Snai3 Dipodomys ordii ENSDORG00000011547 I 0.767
Snai3 Mus musculus ENSMUSG00000006587 I 0.765
ENSPPYG00000007643 Pongo abelii ENSPPYG00000007643 I 0.763
Snai3 Rattus norvegicus ENSRNOG00000013586 I 0.763
SNAI3 Equus caballus ENSECAG00000012131 I 0.763
SNAI3 Pan troglodytes ENSPTRG00000008460 I 0.761
ENSCSAG00000003047 Chlorocebus sabaeus ENSCSAG00000003047 I 0.761
ENSP00000327968 Macaca fascicularis ENSP00000327968 I 0.761
ENSPANG00000000509 Papio anubis ENSPANG00000000509 I 0.761
SNAI3 Macaca mulatta ENSMMUG00000008716 I 0.761
SNAI3 Homo sapiens ENSG00000185669 D 0.761
SNAI3 Gorilla gorilla ENSGGOG00000012559 I 0.761
ENSCPOG00000012706 Cavia porcellus ENSCPOG00000012706 I 0.760