CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RREB1
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000005300
T097261_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RREB1
M02665_2.00
Homo sapiens
MCMCMAMMCAMCMMCHMMSV
BSKKDGKKGKTGKKTKGKGK
SELEX
Mathelier et al.(2014)
MA0073.1
0.818
0.982
RREB1
M10203_2.00
Homo sapiens
MCCCAAMCMMMCMM
KKGKKKGKTTGGGK
Transfac
Matys et al.(2006)
V$RREB1_01
0.818
0.982
RREB1
M10204_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RREB1_Q5
0.818
0.982
RREB1
M10205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RREB_Q5
0.818
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000004443
C2H2 ZF
65
87
YNCPLCEKICTTQHQLTMHIRQH
ENSLAFP00000004443
C2H2 ZF
96
118
HSCSICGKSLSSASSLDRHMLVH
ENSLAFP00000004443
C2H2 ZF
124
146
YKCTVCGQSFTTNGNMHRHMKIH
ENSLAFP00000004443
C2H2 ZF
640
662
YPCRFCNQVFAFSGVLRAHVRSH
ENSLAFP00000004443
C2H2 ZF
668
690
YQCNICDYIAADKAALIRHLRTH
ENSLAFP00000004443
C2H2 ZF
696
719
YICKICHYPFTVKANCERHLRKKH
ENSLAFP00000004443
C2H2 ZF
750
772
TVCRLCGEDLKHYRALRIHMRAH
ENSLAFP00000004443
C2H2 ZF
787
810
FECKECSSAFTAKRNCVHHILKQH
ENSLAFP00000004443
C2H2 ZF
1252
1274
ISCPHCPRVFPWASSLQRHMLTH
ENSLAFP00000004443
C2H2 ZF
1280
1303
FPCQKCDAFFSTKSNCERHQLRKH
ENSLAFP00000004443
C2H2 ZF
1571
1593
KVCSVCNKRFWSLQDLTRHMRSH
ENSLAFP00000004443
C2H2 ZF
1599
1621
YKCQTCERTFTLKHSLVRHQRIH
ENSLAFP00000018110
C2H2 ZF
65
87
YNCPLCEKICTTQHQLTMHIRQH
ENSLAFP00000018110
C2H2 ZF
96
118
HSCSICGKSLSSASSLDRHMLVH
ENSLAFP00000018110
C2H2 ZF
124
146
YKCTVCGQSFTTNGNMHRHMKIH
ENSLAFP00000018110
C2H2 ZF
640
662
YPCRFCNQVFAFSGVLRAHVRSH
ENSLAFP00000018110
C2H2 ZF
668
690
YQCNICDYIAADKAALIRHLRTH
ENSLAFP00000018110
C2H2 ZF
696
719
YICKICHYPFTVKANCERHLRKKH
ENSLAFP00000018110
C2H2 ZF
750
772
TVCRLCGEDLKHYRALRIHMRAH
ENSLAFP00000018110
C2H2 ZF
787
810
FECKECSSAFTAKRNCVHHILKQH
ENSLAFP00000018110
C2H2 ZF
1516
1538
KVCSVCNKRFWSLQDLTRHMRSH
ENSLAFP00000018110
C2H2 ZF
1544
1566
YKCQTCERTFTLKHSLVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy