RBAK (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000008833 T097310_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBAK
M07595_2.00 		Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData 		0.762 0.901
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000007420 C2H2 ZF 254 276
ENSLAFP00000007420 C2H2 ZF 282 304
ENSLAFP00000007420 C2H2 ZF 310 332
ENSLAFP00000007420 C2H2 ZF 338 360
ENSLAFP00000007420 C2H2 ZF 366 388
ENSLAFP00000007420 C2H2 ZF 394 416
ENSLAFP00000007420 C2H2 ZF 422 444
ENSLAFP00000007420 C2H2 ZF 450 472
ENSLAFP00000007420 C2H2 ZF 504 523
ENSLAFP00000007420 C2H2 ZF 532 554
ENSLAFP00000007420 C2H2 ZF 560 582
ENSLAFP00000007420 C2H2 ZF 588 610
ENSLAFP00000007420 C2H2 ZF 616 638
ENSLAFP00000007420 C2H2 ZF 644 666

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPANG00000015671 Papio anubis ENSPANG00000015671 I 0.762
RBAK Pan troglodytes ENSPTRG00000018880 I 0.762
ENSP00000275423 Macaca fascicularis ENSP00000275423 I 0.762
ENSMMUG00000006521 Macaca mulatta ENSMMUG00000006521 I 0.762
ENSNLEG00000015490 Nomascus leucogenys ENSNLEG00000015490 I 0.762
ENSCSAG00000017653 Chlorocebus sabaeus ENSCSAG00000017653 I 0.762
RBAK Homo sapiens ENSG00000146587 D 0.762
RBAK Gorilla gorilla ENSGGOG00000008465 I 0.762
RBAK Callithrix jacchus ENSCJAG00000021500 I 0.761
ENSPPYG00000017329 Pongo abelii ENSPPYG00000017329 I 0.760
ENSOARG00000002641 Ovis aries ENSOARG00000002641 I 0.757
RBAK Otolemur garnettii ENSOGAG00000006946 N 0.756