CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RBAK
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000008833
T097310_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RBAK
M07595_2.00
Homo sapiens
BSYYBYTYSTYHCBN
NVGDRASRARVRRSV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
RBAK.RCADE.ReprocessedData
0.762
0.901
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000007420
C2H2 ZF
254
276
YECSECGKSFCKKSKFIIHQRAH
ENSLAFP00000007420
C2H2 ZF
282
304
YACNVCGKSFSQKGTLTVHRRSH
ENSLAFP00000007420
C2H2 ZF
310
332
YKCNECGKTFCQKLHLTQHQRTH
ENSLAFP00000007420
C2H2 ZF
338
360
YECNECGKTFCQKTHLTLHQRNH
ENSLAFP00000007420
C2H2 ZF
366
388
YPCNECGKSFSRKSALSDHQRTH
ENSLAFP00000007420
C2H2 ZF
394
416
YKCNECGKSYYRKSTLITHQRTH
ENSLAFP00000007420
C2H2 ZF
422
444
YQCSECGKFFSRVSYLTIHYRSH
ENSLAFP00000007420
C2H2 ZF
450
472
YECNECGKTFNLNSAFIRHRKVH
ENSLAFP00000007420
C2H2 ZF
504
523
YECNECGKTFLENSAFDGHH
ENSLAFP00000007420
C2H2 ZF
532
554
YACNICGKLFSDLSYYTEHYRSH
ENSLAFP00000007420
C2H2 ZF
560
582
YGCNECGKTFSHNSSLFRHQRVH
ENSLAFP00000007420
C2H2 ZF
588
610
YECYECGKFFSQKSYLTIHHRIH
ENSLAFP00000007420
C2H2 ZF
616
638
YECSKCGKVFSRMSNLTVHYRSH
ENSLAFP00000007420
C2H2 ZF
644
666
YECNECGKVFSQKSYLTVHYRTH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy