BCL11B (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000009254 T097317_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.827 1.000
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.827 1.000
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH

DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.806 0.947
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN

NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.806 0.947
BCL11A
M10187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000007753 C2H2 ZF 431 452
ENSLAFP00000007753 C2H2 ZF 458 480
ENSLAFP00000007753 C2H2 ZF 785 807
ENSLAFP00000007753 C2H2 ZF 813 835
ENSLAFP00000007753 C2H2 ZF 843 866
ENSLAFP00000019091 C2H2 ZF 196 217
ENSLAFP00000019091 C2H2 ZF 223 245
ENSLAFP00000019091 C2H2 ZF 521 543
ENSLAFP00000019091 C2H2 ZF 549 571
ENSLAFP00000019091 C2H2 ZF 579 602

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

Invalid Input OrderBy

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action