CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OVOL2
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000010597
T097335_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.825
0.989
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.825
0.989
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.825
0.989
OVOL2
M10207_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.825
0.989
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.825
0.989
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.825
0.989
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN
NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.813
0.967
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN
NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.770
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000008874
C2H2 ZF
105
127
HSCDLCGKGFRLQRMLNRHLKCH
ENSLAFP00000008874
C2H2 ZF
133
155
HLCTFCGKGFNDTFDLKRHVRTH
ENSLAFP00000008874
C2H2 ZF
161
184
YKCDVCNKAFTQRCSLESHLKKIH
ENSLAFP00000008874
C2H2 ZF
200
223
YVCEDCGYTGPTQEDLYLHVNSAH
ENSLAFP00000023127
C2H2 ZF
119
141
HSCDLCGKGFRLQRMLNRHLKCH
ENSLAFP00000023127
C2H2 ZF
147
169
HLCTFCGKGFNDTFDLKRHVRTH
ENSLAFP00000023127
C2H2 ZF
175
198
YKCDVCNKAFTQRCSLESHLKKIH
ENSLAFP00000023127
C2H2 ZF
214
237
YVCEDCGYTGPTQEDLYLHVNSAH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy