ZIC4 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000010922 T097338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZIC4
M02912_2.00
Homo sapiens
KRCCCCCYGYDGNGH

DCNCHRCRGGGGGYM
SELEX
Jolma et al.(2013)
ZIC4_1
0.781 0.991
ZIC4
M04566_2.00
Homo sapiens
BVCMHCMYRYNRYGH

DCRYNRYRKGDKGBV
SELEX
Yin et al.(2017)
ZIC4_eDBD_HT-SELEX
0.781 0.991
ZIC4
M04567_2.00
Homo sapiens
BRCCHCCYRYBGTKH

DMACVRYRGGDGGYV
SELEX
Yin et al.(2017)
ZIC4_eDBD_Methyl-HT-SELEX
0.781 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000009135 C2H2 ZF 141 162
ENSLAFP00000009135 C2H2 ZF 171 198
ENSLAFP00000009135 C2H2 ZF 204 228
ENSLAFP00000009135 C2H2 ZF 234 258
ENSLAFP00000009135 C2H2 ZF 264 288
ENSLAFP00000027544 C2H2 ZF 24 44
ENSLAFP00000027544 C2H2 ZF 53 80
ENSLAFP00000027544 C2H2 ZF 86 110
ENSLAFP00000027544 C2H2 ZF 116 140
ENSLAFP00000027544 C2H2 ZF 146 170

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000002144 Ailuropoda melanoleuca ENSAMEG00000002144 I 0.781
ENSPANG00000024745 Papio anubis ENSPANG00000024745 I 0.781
ENSNLEG00000002375 Nomascus leucogenys ENSNLEG00000002375 I 0.781
ENSMPUG00000011767 Mustela putorius furo ENSMPUG00000011767 I 0.781
ZIC4 Microcebus murinus ENSMICG00000014391 I 0.781
ZIC4 Macaca mulatta ENSMMUG00000004741 I 0.781
ENSPPYG00000014188 Pongo abelii ENSPPYG00000014188 I 0.781
ZIC4 Pteropus vampyrus ENSPVAG00000003870 I 0.781
ENSP00000397695 Macaca fascicularis ENSP00000397695 I 0.781
Myotis_brandtii_Zic4_10009542 Myotis brandtii Myotis_brandtii_Zic4_10009542 I 0.781
ENSP00000397695-D1 Bos grunniens ENSP00000397695-D1 I 0.781
ZIC4 Tursiops truncatus ENSTTRG00000014343 I 0.781
ZIC4 Sus scrofa ENSSSCG00000011693 I 0.781
ENSSTOG00000015977 Ictidomys tridecemlineatus ENSSTOG00000015977 I 0.781
ZIC4 Pan troglodytes ENSPTRG00000015500 I 0.781
ZIC4 Oryctolagus cuniculus ENSOCUG00000010959 I 0.781
ZIC4 Bos taurus ENSBTAG00000014749 I 0.781
ZIC4 Equus caballus ENSECAG00000020070 I 0.781
ZIC4 Canis familiaris ENSCAFG00000008194 I 0.781
ZIC4 Cavia porcellus ENSCPOG00000010981 I 0.781
ZIC4 Homo sapiens ENSG00000174963 D 0.781
ZIC4 Felis catus ENSFCAG00000007059 I 0.781
ENSCSAG00000011405 Chlorocebus sabaeus ENSCSAG00000011405 I 0.781
ZIC4 Erinaceus europaeus ENSEEUG00000000251 I 0.781
ZIC4 Dasypus novemcinctus ENSDNOG00000001881 I 0.779
ZIC4 Gorilla gorilla ENSGGOG00000008924 I 0.779
ZIC4 Ornithorhynchus anatinus ENSOANG00000007364 I 0.771
ZIC4 Procavia capensis ENSPCAG00000008210 I 0.770
Zic4 Rattus norvegicus ENSRNOG00000014871 I 0.767
ZIC4 Otolemur garnettii ENSOGAG00000007463 I 0.767
Zic4 Mus musculus ENSMUSG00000036972 I 0.767
zic4 Xenopus tropicalis XB-GENE-1033015 I 0.762
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I 0.762
ENSOARG00000005467 Ovis aries ENSOARG00000005467 I 0.761
zic4.L Xenopus laevis XB-GENE-1033019 I 0.760
Ogr15027 Ophisaurus gracilis Ogr15027 I 0.760
Pvit_01478 Pogona vitticeps Pvit_01478 I 0.760
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I 0.760
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I 0.760
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I 0.760
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I 0.758
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I 0.757
zic4 Gasterosteus aculeatus ENSGACG00000003685 I 0.757
zic4 Oryzias latipes ENSORLG00000010055 I 0.757
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I 0.757
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I 0.757
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I 0.757
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I 0.757
zic4 Takifugu rubripes ENSTRUG00000017765 I 0.757
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I 0.757
ENSLACG00000008525 Latimeria chalumnae ENSLACG00000008525 I 0.756
ENSGALG00000006810 Gallus gallus ENSGALG00000006810 I 0.756
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I 0.756