CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF235
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000011186
T097341_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF235
M07605_2.00
Homo sapiens
YHWTNNHBHWHHYNWTTTYYTTYHTYTYTT
AARARADRAARRAAAWNRDDWDVDNNAWDR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF235.ChIP-seq.ReprocessedData
0.798
0.962
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000009360
C2H2 ZF
174
196
YQCNECENTFSDHLSLELHQQAH
ENSLAFP00000009360
C2H2 ZF
230
252
YWCHECGKGFSQSSNLQTHQRVH
ENSLAFP00000009360
C2H2 ZF
258
280
YTCHECGKSFNQSSHLYAHLPIH
ENSLAFP00000009360
C2H2 ZF
286
308
YRCDSCGKGFSRSTDLNIHCRVH
ENSLAFP00000009360
C2H2 ZF
314
336
YKCEVCGKGFTQRSHLQAHQRIH
ENSLAFP00000009360
C2H2 ZF
342
364
YKCGDCGKRFSCSSNLHTHQRVH
ENSLAFP00000009360
C2H2 ZF
370
392
YKCDECGKCFSLSFNLHSHQRVH
ENSLAFP00000009360
C2H2 ZF
398
420
YKCEECGKGFSSASSFQSHQRVH
ENSLAFP00000009360
C2H2 ZF
426
448
FQCNVCGKGFSQSSYFQAHQRVH
ENSLAFP00000009360
C2H2 ZF
454
476
YKCEVCGKRFNWSLNLHNHQRVH
ENSLAFP00000009360
C2H2 ZF
482
504
YKCEECGKGFSQASNLQAHQSVH
ENSLAFP00000009360
C2H2 ZF
510
532
FKCDACQKRFSQASHLQAHQRVH
ENSLAFP00000009360
C2H2 ZF
538
560
YKCDTCGKAFSQRSNLQVHQIIH
ENSLAFP00000009360
C2H2 ZF
566
588
FKCEECGKEFSWSAGLSAHQRVH
ENSLAFP00000009360
C2H2 ZF
594
616
YTCQQCGKGFSQASHFHTHQRVH
ENSLAFP00000009360
C2H2 ZF
622
644
YICDVCCKGFSQRSHLVYHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy