ZNF250 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000016670 T097403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB

VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.805 0.953
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY

RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.805 0.953
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB

VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.805 0.953
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC

GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.805 0.953
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN

NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.805 0.953
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000013990 C2H2 ZF 173 195
ENSLAFP00000013990 C2H2 ZF 201 223
ENSLAFP00000013990 C2H2 ZF 229 251
ENSLAFP00000013990 C2H2 ZF 257 279
ENSLAFP00000013990 C2H2 ZF 285 307
ENSLAFP00000013990 C2H2 ZF 313 335
ENSLAFP00000013990 C2H2 ZF 341 363
ENSLAFP00000013990 C2H2 ZF 369 391
ENSLAFP00000013990 C2H2 ZF 397 419
ENSLAFP00000013990 C2H2 ZF 425 447
ENSLAFP00000013990 C2H2 ZF 453 475
ENSLAFP00000013990 C2H2 ZF 481 503
ENSLAFP00000013990 C2H2 ZF 509 531

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

Invalid Input OrderBy

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action