ENSLAFG00000032414 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000032414 T097514_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YY1
M08237_2.00
Homo sapiens
VNVGCVGCCATBTTD

HAAVATGGCBGCBNB
ChIP-seq
Najafabadi et al.(2015b)
YY1
0.827 1.000
YY1
M02877_2.00
Homo sapiens
NVSRCCATNDH

DHNATGGYSBN
SELEX
Jolma et al.(2013)
YY1_1
0.827 0.989
YY1
M04406_2.00
Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK

MGCACDNWHNVYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1
0.827 0.989
YY1
M04407_2.00
Homo sapiens
NKMCGCCATYTTGN

NCAARATGGCGKMN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2
0.827 0.989
YY1
M05845_2.00
Homo sapiens
NNNVGCCATNWYD

HRWNATGGCBNNN
SMiLE-seq
Isakova et al.(2017)
YY1
0.827 0.989
YY1
M08288_2.00
Homo sapiens
GCCGCCATBKYB

VRMVATGGCGGC
ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE
0.827 0.989
YY1
M08085_2.00
Homo sapiens
KCVGCCATBTTK

MAAVATGGCBGM
ChIP-seq
Mathelier et al.(2014)
MA0095.2
0.827 0.989
YY1
M07855_2.00
Homo sapiens
VNVGCCGCCATBTTK

MAAVATGGCGGCBNB
ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha
0.827 0.989
YY1
M07856_2.00
Homo sapiens
GCSGCCATBTT

AAVATGGCSGC
ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha
0.827 0.989
YY1
M07857_2.00
Homo sapiens
BSNVGCSGCCATBTT

AAVATGGCSGCBNSV
ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha
0.827 0.989
YY1
M07858_2.00
Homo sapiens
NNVGCSGCCATBTTK

MAAVATGGCSGCBNN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha
0.827 0.989
YY1
M07859_2.00
Homo sapiens
SBSGCSGCCATBTTK

MAAVATGGCSGCSVS
ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD
0.827 0.989
YY1
M07860_2.00
Homo sapiens
GCCGCCATBTTKNNN

NNNMAAVATGGCGGC
ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha
0.827 0.989
YY1
M07861_2.00
Homo sapiens
VGCSGCCATBTTK

MAAVATGGCSGCB
ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD
0.827 0.989
YY1
M08865_2.00
Homo sapiens
GCCGCCATYTTK

MAARATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A
0.827 0.989
Yy1
M08971_2.00
Mus musculus
GCCGCCATBTTB

VAAVATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A
0.827 0.989
YY1
M10138_2.00
Homo sapiens
NVNNDCCATNTWNNVWN

NWBNNWANATGGHNNBN
Transfac
Matys et al.(2006)
V$YY1_01
0.827 0.989
YY1
M10139_2.00
Homo sapiens
NNNSBGCCATCTDSNHTSND

HNSADNSHAGATGGCVSNNN
Transfac
Matys et al.(2006)
V$YY1_02
0.827 0.989
YY1
M10140_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_03
0.827 0.989
YY1
M10141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_07
0.827 0.989
YY1
M10142_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_08
0.827 0.989
YY1
M10143_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q4_01
0.827 0.989
YY1
M10144_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_02
0.827 0.989
YY1
M10145_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_03
0.827 0.989
YY1
M10146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6
0.827 0.989
YY1
M04408_2.00
Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY

RGCACDWWHHGYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1
0.827 0.989
YY1
M04409_2.00
Homo sapiens
RKCSGCCATYTTGD

HCAARATGGCSGMY
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2
0.827 0.989
TYY2_RAT
M10385_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY2
0.816 0.902
pho
M06053_2.00
Drosophila melanogaster
KNVGCCATDAHNSY

RSNDTHATGGCBNM
B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521
0.809 0.935
pho
M06054_2.00
Drosophila melanogaster
KCCGCCATHWTK

MAWDATGGCGGM
B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521
0.809 0.935
pho
M06055_2.00
Drosophila melanogaster
NKBCGCCATHWTKNN

NNMAWDATGGCGVMN
B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521
0.809 0.935
phol
M06144_2.00
Drosophila melanogaster
CGCCATHTTK

MAADATGGCG
B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997
0.767 0.826
phol
M06145_2.00
Drosophila melanogaster
NKNCGCCATNTTKNN

NNMAANATGGCGNMN
B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997
0.767 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000018692 C2H2 ZF 71 95
ENSLAFP00000018692 C2H2 ZF 100 122
ENSLAFP00000018692 C2H2 ZF 128 152
ENSLAFP00000018692 C2H2 ZF 158 182
ENSLAFP00000020814 C2H2 ZF 73 97
ENSLAFP00000020814 C2H2 ZF 133 156
ENSLAFP00000020814 C2H2 ZF 162 186

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL003947 Aedes aegypti AAEL003947 I 0.000
AATE018350 Anopheles atroparvus AATE018350 I 0.000
ACEP16670 Atta cephalotes ACEP16670 I 0.000
ACOM028540 Anopheles coluzzii ACOM028540 I 0.000
ACYPI002482 Acyrthosiphon pisum ACYPI002482 I 0.000
ADIR010658 Anopheles dirus ADIR010658 I 0.000
AFAF006554 Anopheles farauti AFAF006554 I 0.000
AGAP003537 Anopheles gambiae AGAP003537 I 0.000
AQUA014152 Anopheles quadriannulatus AQUA014152 I 0.000
ASIS009996 Anopheles sinensis ASIS009996 I 0.000
ASTEI09331 Anopheles stephensi ASTEI09331 I 0.000
BGIBMGA007531 Bombyx mori BGIBMGA007531 I 0.000
CLEC025104 Cimex lectularius CLEC025104 I 0.000
CPIJ009646 Culex quinquefasciatus CPIJ009646 I 0.000
CpipJ_CPIJ009646 Culex pipiens CpipJ_CPIJ009646 I 0.000
ttk Drosophila melanogaster FBgn0003870 D 0.000
ttk Drosophila pseudoobscura FBgn0075017 I 0.000
GF22980 Drosophila ananassae FBgn0099974 I 0.000
GG11824 Drosophila erecta FBgn0104119 I 0.000
GH18648 Drosophila grimshawi FBgn0126115 I 0.000
GI23127 Drosophila mojavensis FBgn0145854 I 0.000
GM16443 Drosophila sechellia FBgn0171358 I 0.000
ttk Drosophila simulans FBgn0193021 I 0.000
GJ23101 Drosophila virilis FBgn0210203 I 0.000
GK12114 Drosophila willistoni FBgn0214125 I 0.000
ttk Drosophila yakuba FBgn0228787 I 0.000
GB47059 Apis mellifera GB47059 I 0.000
HHAL005482-PA Halyomorpha halys HHAL005482-PA I 0.000
KGM_19334 Danaus plexippus KGM_19334 I 0.000
LCUP007919 Lucilia cuprina LCUP007919 I 0.000
MDOA014587 Musca domestica MDOA014587 I 0.000
NV30328 Nasonia vitripennis NV30328 I 0.000
PHUM489940 Pediculus humanus PHUM489940 I 0.000
RPRC013755 Rhodnius prolixus RPRC013755 I 0.000
SINV13240 Solenopsis invicta SINV13240 I 0.000
TC013843 Tribolium castaneum TC013843 I 0.000