CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000002928
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000002928
T097578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF276
M04495_2.00
Homo sapiens
NWAAGGWSGWVDMKACNHCCTTWAN
NTWAAGGDNGTMKHBWCSWCCTTWN
SELEX
Yin et al.(2017)
ZNF276_eDBD_HT-SELEX
0.814
0.965
ZNF276
M04496_2.00
Homo sapiens
STTAAGGBSGWVWATACYHCCTTAMN
NKTAAGGDRGTATWBWCSVCCTTAAS
SELEX
Yin et al.(2017)
ZNF276_eDBD_Methyl-HT-SELEX
0.814
0.965
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000003447
C2H2 ZF
442
467
YKCPYQGCTAVYRGADGMKKHIKEHH
ENSLOCP00000003447
C2H2 ZF
474
498
PCPHPGCNKVFMIDRYLQRHVKLIH
ENSLOCP00000003447
C2H2 ZF
504
526
YICDQCGQTFKQRKHLSVHQMRH
ENSLOCP00000003447
C2H2 ZF
532
554
LQCEVCGFQCRQRASLKYHMTKH
ENSLOCP00000003447
C2H2 ZF
562
585
FACDLCGKRFEKAHNLNVHMSMVH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy