CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSLOCG00000003071
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000003071
T097581_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.816
0.947
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.816
0.947
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.816
0.947
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.816
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000003612
C2H2 ZF
479
504
QVCRWIDCSATYDQQEELVRHIEKVH
ENSLOCP00000003612
C2H2 ZF
513
540
FTCFWAGCIRRYKPFNARYKLLIHMRVH
ENSLOCP00000003612
C2H2 ZF
547
570
KCMFEGCNKAFSRLENLKIHLRSH
ENSLOCP00000003612
C2H2 ZF
576
600
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSLOCP00000003612
C2H2 ZF
606
630
YACQIPGCTKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy