ENSLOCG00000003619 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000003619 T097590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.821 0.957
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG

CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.821 0.950
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG

CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.821 0.950
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.821 0.950
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH

DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.821 0.950
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB

VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.821 0.950
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV

BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.821 0.950
ZNF143
M10249_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.821 0.950
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN

NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.766 0.832
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT

ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.766 0.832
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY

RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.766 0.832
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN

NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.766 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000004298 C2H2 ZF 249 273
ENSLOCP00000004298 C2H2 ZF 279 303
ENSLOCP00000004298 C2H2 ZF 309 333
ENSLOCP00000004298 C2H2 ZF 339 363
ENSLOCP00000004298 C2H2 ZF 369 393
ENSLOCP00000004298 C2H2 ZF 399 423
ENSLOCP00000004298 C2H2 ZF 429 452
ENSLOCP00000004318 C2H2 ZF 276 300
ENSLOCP00000004318 C2H2 ZF 306 330
ENSLOCP00000004318 C2H2 ZF 336 360
ENSLOCP00000004318 C2H2 ZF 366 390
ENSLOCP00000004318 C2H2 ZF 396 420
ENSLOCP00000004318 C2H2 ZF 426 450
ENSLOCP00000004318 C2H2 ZF 456 479

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAH73068 Xenopus laevis AAH73068 I 0.826
znf143 Xenopus tropicalis XB-GENE-1012504 I 0.826
ZNF143 Monodelphis domestica ENSMODG00000007909 I 0.824
znf143.S Xenopus laevis XB-GENE-1012509 I 0.824
Aan_R006576 Calypte anna Aan_R006576 I 0.823
Brh_R005520 Buceros rhinoceros Brh_R005520 I 0.823
ENSFALG00000000985 Ficedula albicollis ENSFALG00000000985 I 0.823
Afo_R014591 Aptenodytes forsteri Afo_R014591 I 0.823
ZNF143 Meleagris gallopavo ENSMGAG00000006206 I 0.823
Gfo_R011843 Geospiza fortis Gfo_R011843 I 0.823
Tal_R001092 Tyto alba Tal_R001092 I 0.823
ENSAPLG00000002385 Anas platyrhynchos ENSAPLG00000002385 I 0.823
ENSTGUG00000008153 Taeniopygia guttata ENSTGUG00000008153 I 0.823
ZNF143 Gallus gallus ENSGALG00000005787 I 0.823
ZNF143 Anolis carolinensis ENSACAG00000009338 I 0.823
ZNF143 Sorex araneus ENSSARG00000007780 I 0.821
ZNF143 Microcebus murinus ENSMICG00000004353 I 0.821
ENSMEUG00000003014 Macropus eugenii ENSMEUG00000003014 I 0.821
Zfp143 Rattus norvegicus ENSRNOG00000010087 I 0.821
ZNF143 Pan troglodytes ENSPTRG00000003349 I 0.821
Zfp143 Mus musculus ENSMUSG00000061079 D 0.821
ZNF143 Oryctolagus cuniculus ENSOCUG00000005226 I 0.821
ENSPANG00000002501 Papio anubis ENSPANG00000002501 I 0.821
ZNF143 Ochotona princeps ENSOPRG00000005466 I 0.821
ENSMPUG00000012796 Mustela putorius furo ENSMPUG00000012796 I 0.821
ENSPPYG00000003495 Pongo abelii ENSPPYG00000003495 I 0.821
ZNF143 Otolemur garnettii ENSOGAG00000011518 I 0.821
ZNF143 Loxodonta africana ENSLAFG00000004487 I 0.821
ENSPSIG00000009683 Pelodiscus sinensis ENSPSIG00000009683 I 0.821
ZNF143 Macaca mulatta ENSMMUG00000008758 I 0.821
ZNF143 Homo sapiens ENSG00000166478 D 0.821
ZNF143 Canis familiaris ENSCAFG00000007373 I 0.821
Alligator_sinensis_CCG018668.1 Alligator sinensis Alligator_sinensis_CCG018668.1 I 0.821
ENSP00000379847 Macaca fascicularis ENSP00000379847 I 0.821
ZNF143 Cavia porcellus ENSCPOG00000003109 I 0.821
ZNF143 Callithrix jacchus ENSCJAG00000011327 I 0.821
Ogr18895 Ophisaurus gracilis Ogr18895 I 0.821
ZNF143 Erinaceus europaeus ENSEEUG00000000955 I 0.821
ZNF143 Equus caballus ENSECAG00000018889 I 0.821
ENSTSYG00000004324 Tarsius syrichta ENSTSYG00000004324 I 0.821
ZNF143 Felis catus ENSFCAG00000002342 I 0.821
ENSAMEG00000003872 Ailuropoda melanoleuca ENSAMEG00000003872 I 0.821
ZNF143 Tursiops truncatus ENSTTRG00000015353 I 0.820
ZNF143 Myotis lucifugus ENSMLUG00000000213 I 0.820
ENSP00000379847-D1 Bos grunniens ENSP00000379847-D1 I 0.820
ZNF143 Ornithorhynchus anatinus ENSOANG00000005853 I 0.820
ENSOARG00000012477 Ovis aries ENSOARG00000012477 I 0.820
znf143b Tetraodon nigroviridis ENSTNIG00000013739 I 0.817
znf143 Takifugu rubripes ENSTRUG00000009324 I 0.817
Pvit_03784 Pogona vitticeps Pvit_03784 I 0.816
znf143b Danio rerio ENSDARG00000041581 I 0.816
ENSGMOG00000001888 Gadus morhua ENSGMOG00000001888 I 0.816
ENSXMAG00000005152 Xiphophorus maculatus ENSXMAG00000005152 I 0.816
ENSCSAG00000004520 Chlorocebus sabaeus ENSCSAG00000004520 I 0.816
ENSPFOG00000008911 Poecilia formosa ENSPFOG00000008911 I 0.816
ENSONIG00000015524 Oreochromis niloticus ENSONIG00000015524 I 0.815
ENSAMXG00000003833 Astyanax mexicanus ENSAMXG00000003833 I 0.815
znf143b Gasterosteus aculeatus ENSGACG00000009776 I 0.814
ENSSTOG00000009647 Ictidomys tridecemlineatus ENSSTOG00000009647 I 0.814
znf143b Oryzias latipes ENSORLG00000001130 I 0.812
ENSLACG00000017669 Latimeria chalumnae ENSLACG00000017669 I 0.812
Myotis_brandtii_ZNF143_10021171 Myotis brandtii Myotis_brandtii_ZNF143_10021171 I 0.810
ENSLOCG00000011655 Lepisosteus oculatus ENSLOCG00000011655 I 0.783
Sakowv30036637m.g Saccoglossus kowalevskii Sakowv30036637m.g I 0.778
Sakowv30044960m.g Saccoglossus kowalevskii Sakowv30044960m.g I 0.778
BGLB001048 Biomphalaria glabrata BGLB001048 I 0.774
ZNF76 Cavia porcellus ENSCPOG00000007381 I 0.773
Ocbimv22038914m.g Octopus bimaculoides Ocbimv22038914m.g I 0.772
znf76 Danio rerio ENSDARG00000013279 I 0.772
SMAR015659 Strigamia maritima SMAR015659 I 0.770
LotgiG222832 Lottia gigantea LotgiG222832 I 0.770
ENSFALG00000003698 Ficedula albicollis ENSFALG00000003698 I 0.768
Gfo_R002960 Geospiza fortis Gfo_R002960 I 0.768
ZNF76 Taeniopygia guttata ENSTGUG00000001745 I 0.768
Alligator_sinensis_CCG020455.1 Alligator sinensis Alligator_sinensis_CCG020455.1 I 0.767
Cmyd_10011173 Chelonia mydas Cmyd_10011173 I 0.767
ENSPSIG00000005652 Pelodiscus sinensis ENSPSIG00000005652 I 0.767
Afo_R002092 Aptenodytes forsteri Afo_R002092 I 0.767
ENSPPYG00000016525 Pongo abelii ENSPPYG00000016525 I 0.766
ZNF76 Callithrix jacchus ENSCJAG00000015519 I 0.766
ENSCSAG00000009955 Chlorocebus sabaeus ENSCSAG00000009955 I 0.766
Myotis_brandtii_ZNF76_10017771 Myotis brandtii Myotis_brandtii_ZNF76_10017771 I 0.766
ZNF76 Canis familiaris ENSCAFG00000001304 I 0.766
ENSPANG00000021154 Papio anubis ENSPANG00000021154 I 0.766
ZNF76 Oryctolagus cuniculus ENSOCUG00000015630 I 0.766
ENSAMEG00000000752 Ailuropoda melanoleuca ENSAMEG00000000752 I 0.766
ENSOPRG00000009136 Ochotona princeps ENSOPRG00000009136 I 0.766
Zfp523 Mus musculus ENSMUSG00000024220 I 0.766
ENSMPUG00000003522 Mustela putorius furo ENSMPUG00000003522 I 0.766
ENSP00000363064 Macaca fascicularis ENSP00000363064 I 0.766
ZNF76 Bos taurus ENSBTAG00000006170 I 0.766
Tal_R002540 Tyto alba Tal_R002540 I 0.766
ZNF76 Choloepus hoffmanni ENSCHOG00000003197 I 0.766
ZNF76 Monodelphis domestica ENSMODG00000013806 I 0.766
ZNF76 Loxodonta africana ENSLAFG00000026071 I 0.766
ZNF76 Pteropus vampyrus ENSPVAG00000008041 I 0.766
ZNF76 Gorilla gorilla ENSGGOG00000014188 I 0.766
Zfp523 Rattus norvegicus ENSRNOG00000000501 I 0.766
ENSSTOG00000000256 Ictidomys tridecemlineatus ENSSTOG00000000256 I 0.766
ENSSHAG00000009934 Sarcophilus harrisii ENSSHAG00000009934 I 0.766
ZNF76 Sus scrofa ENSSSCG00000001537 I 0.766
ENSBTAP00000008112-D1 Bos grunniens ENSBTAP00000008112-D1 I 0.766
ZNF76 Pan troglodytes ENSPTRG00000018080 I 0.766
ZNF76 Equus caballus ENSECAG00000014843 I 0.766
ZNF76 Dasypus novemcinctus ENSDNOG00000015856 I 0.766
ZNF76 Myotis lucifugus ENSMLUG00000008610 I 0.766
ZNF76 Macaca mulatta ENSMMUG00000023559 I 0.766
ZNF76 Otolemur garnettii ENSOGAG00000002935 I 0.766
ZNF76 Homo sapiens ENSG00000065029 D 0.766
ZNF76 Tursiops truncatus ENSTTRG00000009380 I 0.766
ZNF76 Felis catus ENSFCAG00000005893 I 0.766
ENSAMXG00000008869 Astyanax mexicanus ENSAMXG00000008869 I 0.765
estExt_fgenesh2_pg.C_1970081 Branchiostoma floridae estExt_fgenesh2_pg.C_1970081 I 0.758