ENSLOCG00000003619 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000003619 T097590_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.821 0.957
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG

CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.821 0.950
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG

CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.821 0.950
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.821 0.950
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH

DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.821 0.950
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB

VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.821 0.950
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV

BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.821 0.950
ZNF143
M10249_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.821 0.950
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN

NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.766 0.832
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT

ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.766 0.832
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY

RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.766 0.832
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN

NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.766 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000004298 C2H2 ZF 249 273
ENSLOCP00000004298 C2H2 ZF 279 303
ENSLOCP00000004298 C2H2 ZF 309 333
ENSLOCP00000004298 C2H2 ZF 339 363
ENSLOCP00000004298 C2H2 ZF 369 393
ENSLOCP00000004298 C2H2 ZF 399 423
ENSLOCP00000004298 C2H2 ZF 429 452
ENSLOCP00000004318 C2H2 ZF 276 300
ENSLOCP00000004318 C2H2 ZF 306 330
ENSLOCP00000004318 C2H2 ZF 336 360
ENSLOCP00000004318 C2H2 ZF 366 390
ENSLOCP00000004318 C2H2 ZF 396 420
ENSLOCP00000004318 C2H2 ZF 426 450
ENSLOCP00000004318 C2H2 ZF 456 479

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

Invalid Input OrderBy

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action