CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSLOCG00000005336
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000005336
T097633_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.809
0.934
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.809
0.934
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.809
0.934
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000006441
C2H2 ZF
228
249
YRCEDCEELFPSKLDLRRHQKY
ENSLOCP00000006441
C2H2 ZF
277
299
HECKDCEKIFPSEYSLEQHMIVH
ENSLOCP00000006441
C2H2 ZF
305
327
YKCDQCPKAFNWKSNLIRHQMSH
ENSLOCP00000006441
C2H2 ZF
333
356
FECENCDKVFTDPSNLQRHIRSQH
ENSLOCP00000006441
C2H2 ZF
362
384
HTCPECGKTFATSSGLKQHKHIH
ENSLOCP00000006441
C2H2 ZF
390
412
FICEVCHKSYTQFSNLCRHKRMH
ENSLOCP00000006441
C2H2 ZF
419
440
IKCKDCGQMFSTTSSLNKHRRF
ENSLOCP00000006441
C2H2 ZF
975
997
YTCRYCGKIFPRSANLTRHLRTH
ENSLOCP00000006441
C2H2 ZF
1003
1026
YRCKYCDRSFSISSNLQRHVRNIH
ENSLOCP00000006441
C2H2 ZF
1032
1054
FKCHLCNRCFGQQTNLDRHLKKH
ENSLOCP00000006466
C2H2 ZF
85
106
YRCEDCEELFPSKLDLRRHQKY
ENSLOCP00000006466
C2H2 ZF
134
156
HECKDCEKIFPSEYSLEQHMIVH
ENSLOCP00000006466
C2H2 ZF
162
184
YKCDQCPKAFNWKSNLIRHQMSH
ENSLOCP00000006466
C2H2 ZF
190
213
FECENCDKVFTDPSNLQRHIRSQH
ENSLOCP00000006466
C2H2 ZF
219
241
HTCPECGKTFATSSGLKQHKHIH
ENSLOCP00000006466
C2H2 ZF
247
269
FICEVCHKSYTQFSNLCRHKRMH
ENSLOCP00000006466
C2H2 ZF
276
297
IKCKDCGQMFSTTSSLNKHRRF
ENSLOCP00000006466
C2H2 ZF
820
842
YTCRYCGKIFPRSANLTRHLRTH
ENSLOCP00000006466
C2H2 ZF
848
871
YRCKYCDRSFSISSNLQRHVRNIH
ENSLOCP00000006466
C2H2 ZF
877
899
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy