CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ENSLOCG00000005429
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000005429
T097635_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.824
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000006545
C2H2 ZF
261
283
MRCVICHRGFNSRSNLRSHMRIH
ENSLOCP00000006545
C2H2 ZF
289
311
FVCRFCNRRFSQSSTLRNHVRLH
ENSLOCP00000006545
C2H2 ZF
317
341
YKCHVCQSAYSQLAGLRAHQKSARH
ENSLOCP00000006556
C2H2 ZF
245
267
MRCVICHRGFNSRSNLRSHMRIH
ENSLOCP00000006556
C2H2 ZF
273
295
FVCRFCNRRFSQSSTLRNHVRLH
ENSLOCP00000006556
C2H2 ZF
301
325
YKCHVCQSAYSQLAGLRAHQKSARH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy