ENSLOCG00000006478 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000006478 T097655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIC1
M04568_2.00
Homo sapiens
NRTGCCMMCN

NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_HT-SELEX
0.822 0.967
HIC1
M08924_2.00
Homo sapiens
KGGCAMCCH

DGGKTGCCM
Misc
Kulakovskiy et al.(2013)
HIC1_HUMAN.H11MO.0.C
0.822 0.967
HIC1
M10265_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_02
0.822 0.967
HIC1
M10266_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HIC1_03
0.822 0.967
HIC1
M04569_2.00
Homo sapiens
NRTGCCMMCN

NGKKGGCAYN
SELEX
Yin et al.(2017)
HIC1_eDBD_Methyl-HT-SELEX
0.822 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000007822 C2H2 ZF 429 451
ENSLOCP00000007822 C2H2 ZF 457 479
ENSLOCP00000007822 C2H2 ZF 485 507
ENSLOCP00000007822 C2H2 ZF 513 535

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

Invalid Input OrderBy

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action