ENSLOCG00000006558 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000006558 T097656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN

NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.758 0.838
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN

NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.758 0.838
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH

DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.758 0.838
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000007921 C2H2 ZF 135 157
ENSLOCP00000007921 C2H2 ZF 167 189
ENSLOCP00000007921 C2H2 ZF 195 216

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29742.m001400 Ricinus communis 29742.m001400 I 0.000
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I 0.000
ERF023 Arabidopsis thaliana AT1G01250 D 0.000
Bo5g002600 Brassica oleracea Bo5g002600 I 0.000
Bo8g117810 Brassica oleracea Bo8g117810 I 0.000
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I 0.000
Bra032630 Brassica rapa Bra032630 I 0.000
Bra033274 Brassica rapa Bra033274 I 0.000
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I 0.000
Carubv10010347m.g Capsella rubella Carubv10010347m.g I 0.000
cassava32974.m1 Manihot esculenta cassava32974.m1 I 0.000
Ca_01325 Cicer arietinum Ca_01325 I 0.000
Ca_17638 Cicer arietinum Ca_17638 I 0.000
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I 0.000
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.000
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I 0.000
Cla012665 Citrullus lanatus Cla012665 I 0.000
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.000
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I 0.000
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I 0.000
GLYMA03G41910 Glycine max GLYMA03G41910 I 0.000
GLYMA07G06080 Glycine max GLYMA07G06080 I 0.000
GLYMA16G02680 Glycine max GLYMA16G02680 I 0.000
GLYMA19G44580 Glycine max GLYMA19G44580 I 0.000
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I 0.000
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I 0.000
mgf020568m Mimulus guttatus mgf020568m I 0.000
MTR_7g117690 Medicago truncatula MTR_7g117690 I 0.000
MTR_8g027465 Medicago truncatula MTR_8g027465 I 0.000
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I 0.000
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N 0.000
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.000
PK15554.1 Cannabis sativa PK15554.1 I 0.000
Pm018354 Prunus mume Pm018354 I 0.000
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I 0.000
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I 0.000
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I 0.000
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I 0.000
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I 0.000
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I 0.000
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I 0.000
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.000
TCM_005130 Theobroma cacao TCM_005130 I 0.000
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I 0.000
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I 0.000
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.000