CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000007968
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000007968
T097684_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF384
M04451_2.00
Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA
SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX
0.759
0.870
ZNF384
M08306_2.00
Homo sapiens
CTTTTTTTT
AAAAAAAAG
ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE
0.759
0.870
ZNF384
M08090_2.00
Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW
ChIP-seq
Mathelier et al.(2014)
MA1125.1
0.759
0.870
ZNF384
M08888_2.00
Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV
Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C
0.759
0.870
ZNF384
M10209_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CIZ_01
0.759
0.870
ZNF384
M04452_2.00
Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM
SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX
0.759
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000009686
C2H2 ZF
245
267
YRCRMCAVTFFSKSDMQIHAKSH
ENSLOCP00000009686
C2H2 ZF
273
295
HKCPHCSKSFANSSYLAQHIRIH
ENSLOCP00000009686
C2H2 ZF
301
323
YTCSYCQKTFRQLSHLQQHTRSH
ENSLOCP00000009686
C2H2 ZF
329
351
HKCPHCSKSFANSSYLAQHIRIH
ENSLOCP00000009686
C2H2 ZF
357
379
YTCSYCQKTFRQLSHLQQHNRIH
ENSLOCP00000009686
C2H2 ZF
385
409
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSLOCP00000009686
C2H2 ZF
415
437
YKCHNCHRAYTDSASLEVHLSTH
ENSLOCP00000009686
C2H2 ZF
445
467
YSCGMCNRAYTSETYLMKHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy