ENSLOCG00000011983 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000011983 T097728_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG

CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.818 0.974
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK

MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.818 0.974
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV

BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.818 0.974
GLI3
M10167_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.818 0.974
GLI3
M10168_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.818 0.974
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY

RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.818 0.974
Gli2
M01024_2.00
Mus musculus
NGACCACCYN

NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.817 0.939
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB

VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.817 0.939
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR

YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.817 0.939
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN

NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.817 0.939
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG

CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.817 0.939
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG

CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.817 0.939
GLI2
M10114_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.817 0.939
GLI2
M10115_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.817 0.939
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG

CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.817 0.939
Gli1
M01023_2.00
Mus musculus
NGACCACCHN

NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.787 0.878
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG

CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.787 0.878
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV

BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.787 0.878
GLI1
M10176_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.787 0.878
GLI1
M10177_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.787 0.878
GLI1
M10178_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.787 0.878
GLI1
M10179_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.787 0.878
Gli3
M01022_2.00
Mus musculus
NGACCACCCNN

NNGGGTGGTCN
PBM
Peterson et al.(2012)
Gli3
0.771 0.965
Gli3
M08023_2.00
Mus musculus
RGVCCACCCAS

STGGGTGGBCY
ChIP-seq
Chen et al.(2011)
GSE11062_Gli3
0.771 0.965
Gli3
M09512_2.00
Mus musculus
RGACCACCCASR

YSTGGGTGGTCY
Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077
0.771 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000014745 C2H2 ZF 485 510
ENSLOCP00000014745 C2H2 ZF 518 545
ENSLOCP00000014745 C2H2 ZF 551 575
ENSLOCP00000014745 C2H2 ZF 581 606
ENSLOCP00000014745 C2H2 ZF 612 637

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003640 Calypte anna Aan_R003640 I 0.812
Aan_R014715 Calypte anna Aan_R014715 I 0.818
Afo_R006826 Aptenodytes forsteri Afo_R006826 I 0.812
Afo_R007816 Aptenodytes forsteri Afo_R007816 I 0.818
Brh_R008256 Buceros rhinoceros Brh_R008256 I 0.818
Brh_R010932 Buceros rhinoceros Brh_R010932 I 0.812
Cmyd_10007839 Chelonia mydas Cmyd_10007839 I 0.818
Cmyd_10009086 Chelonia mydas Cmyd_10009086 I 0.812
GLI2 Anolis carolinensis ENSACAG00000004133 I 0.809
GLI1 Anolis carolinensis ENSACAG00000006541 I 0.815
GLI3 Anolis carolinensis ENSACAG00000017547 I 0.818
ENSAMEG00000004878 Ailuropoda melanoleuca ENSAMEG00000004878 I 0.787
ENSAMEG00000008405 Ailuropoda melanoleuca ENSAMEG00000008405 I 0.818
ENSAMEG00000008708 Ailuropoda melanoleuca ENSAMEG00000008708 I 0.817
ENSAMXG00000002477 Astyanax mexicanus ENSAMXG00000002477 I 0.813
ENSAMXG00000003125 Astyanax mexicanus ENSAMXG00000003125 I 0.809
ENSAMXG00000006646 Astyanax mexicanus ENSAMXG00000006646 I 0.809
ENSAMXG00000017236 Astyanax mexicanus ENSAMXG00000017236 I 0.812
ENSAPLG00000004361 Anas platyrhynchos ENSAPLG00000004361 I 0.818
ENSAPLG00000005128 Anas platyrhynchos ENSAPLG00000005128 I 0.810
ENSAPLG00000015141 Anas platyrhynchos ENSAPLG00000015141 I 0.812
GLI1 Bos taurus ENSBTAG00000006631 I 0.787
GLI3 Bos taurus ENSBTAG00000010671 I 0.818
GLI2 Bos taurus ENSBTAG00000011682 I 0.817
ENSBTAP00000008704-D1 Bos grunniens ENSBTAP00000008704-D1 I 0.787
GLI1 Canis familiaris ENSCAFG00000000223 I 0.787
GLI3 Canis familiaris ENSCAFG00000003535 I 0.818
GLI2 Canis familiaris ENSCAFG00000004821 I 0.817
GLI3 Choloepus hoffmanni ENSCHOG00000003774 I 0.818
ENSCING00000012018 Ciona intestinalis ENSCING00000012018 I 0.798
ENSCJAG00000003076 Callithrix jacchus ENSCJAG00000003076 I 0.779
GLI1 Callithrix jacchus ENSCJAG00000007324 I 0.787
GLI3 Callithrix jacchus ENSCJAG00000007690 I 0.818
ENSCJAG00000013342 Callithrix jacchus ENSCJAG00000013342 I 0.817
GLI1 Cavia porcellus ENSCPOG00000005414 I 0.787
GLI3 Cavia porcellus ENSCPOG00000013233 I 0.771
GLI2 Cavia porcellus ENSCPOG00000015189 I 0.817
ENSCSAG00000004897 Chlorocebus sabaeus ENSCSAG00000004897 I 0.787
ENSCSAG00000015361 Chlorocebus sabaeus ENSCSAG00000015361 I 0.818
ENSCSAG00000016668 Chlorocebus sabaeus ENSCSAG00000016668 I 0.817
ENSCSAVG00000009575 Ciona savignyi ENSCSAVG00000009575 I 0.798
gli2b Danio rerio ENSDARG00000020884 I 0.809
gli2a Danio rerio ENSDARG00000025641 I 0.759
gli3 Danio rerio ENSDARG00000052131 I 0.815
gli1 Danio rerio ENSDARG00000101244 I 0.822
GLI2 Dasypus novemcinctus ENSDNOG00000008730 I 0.817
GLI1 Dasypus novemcinctus ENSDNOG00000017512 I 0.787
GLI3 Dasypus novemcinctus ENSDNOG00000049286 I 0.818
Gli1 Dipodomys ordii ENSDORG00000007124 I 0.787
ENSECAG00000008016 Equus caballus ENSECAG00000008016 I 0.807
GLI3 Equus caballus ENSECAG00000009281 I 0.818
GLI1 Equus caballus ENSECAG00000011246 I 0.787
GLI3 Echinops telfairi ENSETEG00000003955 I 0.802
GLI1 Echinops telfairi ENSETEG00000006674 I 0.789
ENSFALG00000005113 Ficedula albicollis ENSFALG00000005113 I 0.818
ENSFALG00000013217 Ficedula albicollis ENSFALG00000013217 I 0.812
GLI1 Felis catus ENSFCAG00000002081 I 0.787
GLI3 Felis catus ENSFCAG00000011989 I 0.818
GLI2 Felis catus ENSFCAG00000014531 I 0.817
GLI2 Homo sapiens ENSG00000074047 D 0.817
GLI3 Homo sapiens ENSG00000106571 D 0.818
GLI1 Homo sapiens ENSG00000111087 D 0.787
ENSGACG00000004834 Gasterosteus aculeatus ENSGACG00000004834 I 0.785
gli1 Gasterosteus aculeatus ENSGACG00000006458 I 0.764
GLI2 Gallus gallus ENSGALG00000011630 I 0.812
ENSGALG00000012329 Gallus gallus ENSGALG00000012329 I 0.818
ENSGALG00000014639 Gallus gallus ENSGALG00000014639 I 0.820
GLI1 Gorilla gorilla ENSGGOG00000001974 I 0.787
GLI3 Gorilla gorilla ENSGGOG00000002026 I 0.818
GLI2 Gorilla gorilla ENSGGOG00000009653 I 0.813
ENSGMOG00000007975 Gadus morhua ENSGMOG00000007975 I 0.764
ENSGMOG00000010335 Gadus morhua ENSGMOG00000010335 I 0.761
ENSLACG00000017364 Latimeria chalumnae ENSLACG00000017364 I 0.817
GLI3 Loxodonta africana ENSLAFG00000008944 I 0.818
GLI1 Loxodonta africana ENSLAFG00000022910 I 0.787
ENSLOCG00000002028 Lepisosteus oculatus ENSLOCG00000002028 I 0.763
ENSLOCG00000005938 Lepisosteus oculatus ENSLOCG00000005938 I 0.812
ENSMEUG00000009702 Macropus eugenii ENSMEUG00000009702 I 0.787
ENSMEUG00000013134 Macropus eugenii ENSMEUG00000013134 I 0.818
ENSMGAG00000003540 Meleagris gallopavo ENSMGAG00000003540 I 0.820
GLI2 Meleagris gallopavo ENSMGAG00000011872 I 0.812
GLI3 Meleagris gallopavo ENSMGAG00000012277 I 0.818
GLI3 Microcebus murinus ENSMICG00000010785 I 0.802
GLI1 Myotis lucifugus ENSMLUG00000001013 I 0.787
GLI3 Myotis lucifugus ENSMLUG00000015711 I 0.818
GLI2 Macaca mulatta ENSMMUG00000001868 I 0.817
GLI3 Macaca mulatta ENSMMUG00000013614 I 0.818
GLI1 Macaca mulatta ENSMMUG00000022058 I 0.787
ENSMMUP00000002494 Macaca fascicularis ENSMMUP00000002494 I 0.817
GLI2 Monodelphis domestica ENSMODG00000000245 I 0.821
GLI3 Monodelphis domestica ENSMODG00000002714 I 0.818
ENSMPUG00000000986 Mustela putorius furo ENSMPUG00000000986 I 0.817
ENSMPUG00000001825 Mustela putorius furo ENSMPUG00000001825 I 0.787
ENSMPUG00000018143 Mustela putorius furo ENSMPUG00000018143 I 0.818
Gli3 Mus musculus ENSMUSG00000021318 D 0.771
Gli1 Mus musculus ENSMUSG00000025407 D 0.787
Gli2 Mus musculus ENSMUSG00000048402 D 0.817
ENSNLEG00000000944 Nomascus leucogenys ENSNLEG00000000944 I 0.817
ENSNLEG00000003160 Nomascus leucogenys ENSNLEG00000003160 I 0.818
ENSNLEG00000017337 Nomascus leucogenys ENSNLEG00000017337 I 0.787
GLI3 Ornithorhynchus anatinus ENSOANG00000010699 I 0.818
ENSOARG00000006674 Ovis aries ENSOARG00000006674 I 0.787
ENSOARG00000013052 Ovis aries ENSOARG00000013052 I 0.817
ENSOARG00000017420 Ovis aries ENSOARG00000017420 I 0.818
GLI2 Oryctolagus cuniculus ENSOCUG00000000638 I 0.817
GLI3 Oryctolagus cuniculus ENSOCUG00000006563 I 0.818
GLI1 Oryctolagus cuniculus ENSOCUG00000011128 I 0.787
GLI1 Otolemur garnettii ENSOGAG00000005219 I 0.787
GLI3 Otolemur garnettii ENSOGAG00000012651 I 0.818
GLI2 Otolemur garnettii ENSOGAG00000032438 I 0.822
ENSONIG00000003608 Oreochromis niloticus ENSONIG00000003608 I 0.766
ENSONIG00000004472 Oreochromis niloticus ENSONIG00000004472 I 0.763
ENSONIG00000005084 Oreochromis niloticus ENSONIG00000005084 I 0.762
ENSONIG00000006298 Oreochromis niloticus ENSONIG00000006298 I 0.785
GLI1 Ochotona princeps ENSOPRG00000006483 I 0.787
GLI3 Ochotona princeps ENSOPRG00000011225 I 0.818
gli1 Oryzias latipes ENSORLG00000005455 I 0.762
gli2b Oryzias latipes ENSORLG00000012490 I 0.785
ENSP00000228682 Macaca fascicularis ENSP00000228682 I 0.787
ENSP00000379258 Macaca fascicularis ENSP00000379258 I 0.818
ENSP00000390436-D1 Bos grunniens ENSP00000390436-D1 I 0.817
ENSPANG00000014545 Papio anubis ENSPANG00000014545 I 0.818
ENSPANG00000017044 Papio anubis ENSPANG00000017044 I 0.787
ENSPANG00000024168 Papio anubis ENSPANG00000024168 I 0.817
GLI2 Procavia capensis ENSPCAG00000001704 I 0.814
GLI3 Procavia capensis ENSPCAG00000015092 I 0.818
GLI1 Procavia capensis ENSPCAG00000015756 I 0.783
ENSPFOG00000005116 Poecilia formosa ENSPFOG00000005116 I 0.812
ENSPFOG00000006269 Poecilia formosa ENSPFOG00000006269 I 0.762
ENSPFOG00000014778 Poecilia formosa ENSPFOG00000014778 I 0.766
ENSPFOG00000019294 Poecilia formosa ENSPFOG00000019294 I 0.785
ENSPPYG00000004689 Pongo abelii ENSPPYG00000004689 I 0.787
ENSPPYG00000012778 Pongo abelii ENSPPYG00000012778 I 0.817
ENSPPYG00000017613 Pongo abelii ENSPPYG00000017613 I 0.818
ENSPSIG00000008752 Pelodiscus sinensis ENSPSIG00000008752 I 0.812
ENSPSIG00000017804 Pelodiscus sinensis ENSPSIG00000017804 I 0.818
GLI1 Pan troglodytes ENSPTRG00000005133 I 0.787
GLI2 Pan troglodytes ENSPTRG00000012413 I 0.817
GLI3 Pan troglodytes ENSPTRG00000019117 I 0.818
GLI1 Pteropus vampyrus ENSPVAG00000012109 I 0.787
GLI3 Pteropus vampyrus ENSPVAG00000015920 I 0.818
Gli2 Rattus norvegicus ENSRNOG00000007261 I 0.817
Gli3 Rattus norvegicus ENSRNOG00000014395 I 0.771
Gli1 Rattus norvegicus ENSRNOG00000025120 I 0.787
ENSSHAG00000004233 Sarcophilus harrisii ENSSHAG00000004233 I 0.821
ENSSHAG00000006652 Sarcophilus harrisii ENSSHAG00000006652 I 0.787
ENSSHAG00000009727 Sarcophilus harrisii ENSSHAG00000009727 I 0.818
GLI2 Sus scrofa ENSSSCG00000015733 I 0.817
ENSSTOG00000004582 Ictidomys tridecemlineatus ENSSTOG00000004582 I 0.817
ENSSTOG00000020366 Ictidomys tridecemlineatus ENSSTOG00000020366 I 0.787
ENSSTOG00000020844 Ictidomys tridecemlineatus ENSSTOG00000020844 I 0.771
GLI3 Tupaia belangeri ENSTBEG00000006673 I 0.818
ENSTGUG00000001834 Taeniopygia guttata ENSTGUG00000001834 I 0.771
GLI2 Taeniopygia guttata ENSTGUG00000004599 I 0.812
gli1 Tetraodon nigroviridis ENSTNIG00000007058 I 0.766
gli2b Tetraodon nigroviridis ENSTNIG00000010251 I 0.798
gli2b Tetraodon nigroviridis ENSTNIG00000013668 I 0.787
gli2b Tetraodon nigroviridis ENSTNIG00000017828 I 0.800
gli2b Takifugu rubripes ENSTRUG00000007692 I 0.787
gli2b Takifugu rubripes ENSTRUG00000010444 I 0.809
gli1 Takifugu rubripes ENSTRUG00000014998 I 0.764
ENSTSYG00000009406 Tarsius syrichta ENSTSYG00000009406 I 0.818
GLI2 Tursiops truncatus ENSTTRG00000002058 I 0.807
GLI3 Tursiops truncatus ENSTTRG00000003628 I 0.818
GLI1 Tursiops truncatus ENSTTRG00000013086 I 0.787
ENSXMAG00000001777 Xiphophorus maculatus ENSXMAG00000001777 I 0.785
ENSXMAG00000006443 Xiphophorus maculatus ENSXMAG00000006443 I 0.812
ENSXMAG00000017965 Xiphophorus maculatus ENSXMAG00000017965 I 0.762
Gfo_R001212 Geospiza fortis Gfo_R001212 I 0.812
Gfo_R007869 Geospiza fortis Gfo_R007869 I 0.818
Gfo_R013682 Geospiza fortis Gfo_R013682 I 0.810
HelroG111329 Helobdella robusta HelroG111329 I 0.768
Myotis_brandtii_GLI1_10018379 Myotis brandtii Myotis_brandtii_GLI1_10018379 I 0.787
Myotis_brandtii_Gli2_10019076 Myotis brandtii Myotis_brandtii_Gli2_10019076 I 0.817
Ogr02489 Ophisaurus gracilis Ogr02489 I 0.809
Pvit_05813 Pogona vitticeps Pvit_05813 I 0.815
Pvit_06470 Pogona vitticeps Pvit_06470 I 0.809
Pvit_19093 Pogona vitticeps Pvit_19093 I 0.818
Tal_R006208 Tyto alba Tal_R006208 I 0.812
Tal_R009020 Tyto alba Tal_R009020 I 0.810
gli2.L Xenopus laevis XB-GENE-17342592 I 0.779
gli1 Xenopus tropicalis XB-GENE-482644 I 0.768
gli2.S Xenopus laevis XB-GENE-6251939 I 0.778
gli1.S Xenopus laevis XB-GENE-864895 I 0.768
gli3.L Xenopus laevis XB-GENE-865509 I 0.818
XP_002933449 Xenopus tropicalis XP_002933449 I 0.818
XP_002933450 Xenopus tropicalis XP_002933450 I 0.818