CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000014806
(
Lepisosteus oculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLOCG00000014806
T097752_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf9
M00777_2.00
Mus musculus
NCCGTTAN
NTAACGGN
PBM
Weirauch et al.(2013)
pTH2353
0.775
0.870
KLF9
M08088_2.00
Homo sapiens
NVMCACACCCMBN
NVKGGGTGTGKBN
ChIP-seq
Mathelier et al.(2014)
MA1107.1
0.775
0.870
KLF9
M08880_2.00
Homo sapiens
NGCCMCGCCCMCBBS
SVVGKGGGCGKGGCN
Misc
Kulakovskiy et al.(2013)
KLF9_HUMAN.H11MO.0.C
0.775
0.870
Klf9
M10345_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB1_01
0.775
0.870
KLF13
M02903_2.00
Homo sapiens
DDRMCACGCCCCYTTNDK
MHNAARGGGGCGTGKYHH
SELEX
Jolma et al.(2013)
KLF13_1
0.775
0.913
KLF13
M04537_2.00
Homo sapiens
NRCCACRCCCMCN
NGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_HT-SELEX
0.775
0.913
KLF13
M04539_2.00
Homo sapiens
NRCCACRCCCMYN
NRKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_HT-SELEX
0.775
0.913
KLF13
M04538_2.00
Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_eDBD_Methyl-HT-SELEX
0.775
0.913
KLF13
M04540_2.00
Homo sapiens
NRCCACRCCCMCH
DGKGGGYGTGGYN
SELEX
Yin et al.(2017)
KLF13_FL_Methyl-HT-SELEX
0.775
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000018229
C2H2 ZF
131
155
HKCHYSGCEKVYGKSSHLKAHLRTH
ENSLOCP00000018229
C2H2 ZF
161
185
FPCTWPDCSKKFARSDELARHYRTH
ENSLOCP00000018229
C2H2 ZF
191
213
FGCPLCEKRFMRSDHLMKHARRH
Links
Other
C2H2 ZF
family TFs
Other
Lepisosteus oculatus
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy