CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000004495
(
Macropus eugenii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMEUG00000004495
T097873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM4
M02881_2.00
Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA
SELEX
Jolma et al.(2013)
PRDM4_1
0.819
0.963
PRDM4
M04421_2.00
Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX
0.819
0.963
PRDM4
M04422_2.00
Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1
0.819
0.963
PRDM4
M04423_2.00
Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2
0.819
0.963
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000004094
C2H2 ZF
587
609
WKCSMCPQAFISPSKLHVHFMGH
ENSMEUP00000004094
C2H2 ZF
616
637
KCDFCSKAFSDPSNLRTHLKIH
ENSMEUP00000004094
C2H2 ZF
643
665
YRCALCDKSFTQKAHLESHMVIH
ENSMEUP00000004094
C2H2 ZF
671
693
LKCDYCDKLFMRRQDLKQHVLTH
ENSMEUP00000004094
C2H2 ZF
699
721
IKCPKCEKLFLRTNHLKKHLNSH
ENSMEUP00000004094
C2H2 ZF
727
748
YVCEKCSKAYLTKYHLTRHLKI
Links
Other
C2H2 ZF
family TFs
Other
Macropus eugenii
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy