CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000016293
(
Macropus eugenii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMEUG00000016293
T098073_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC
GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.789
0.993
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.789
0.993
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.789
0.993
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000014898
C2H2 ZF
70
92
LPCGLCGKVFTDAGRLRQHEAQH
ENSMEUP00000014898
C2H2 ZF
134
155
ACEICGKIFRDVYHLNRHKLSH
ENSMEUP00000014898
C2H2 ZF
161
183
YSCPVCGLRFKRKDRMSYHVRSH
ENSMEUP00000014898
C2H2 ZF
191
214
YICQSCGKGFSRPDHLNGHIKQVH
ENSMEUP00000014898
C2H2 ZF
220
242
HKCQTCNASFATRDRLRSHLACH
ENSMEUP00000014898
C2H2 ZF
274
296
FCSICNRGFSSASYLKVHVKTHH
Links
Other
C2H2 ZF
family TFs
Other
Macropus eugenii
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy