PATZ1 (Meleagris gallopavo)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMGAG00000008439 T098166_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC

GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.824 0.985
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY

RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.824 0.985
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH

DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000008656 C2H2 ZF 163 185
ENSMGAP00000008656 C2H2 ZF 227 248
ENSMGAP00000008656 C2H2 ZF 254 276
ENSMGAP00000008656 C2H2 ZF 284 307
ENSMGAP00000008656 C2H2 ZF 313 335
ENSMGAP00000008656 C2H2 ZF 367 389

Links

Other C2H2 ZF family TFs
Other Meleagris gallopavo TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AACERI_AaceriAAR026W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAR026W I 0.000
M404DRAFT_69899 Pisolithus tinctorius M404DRAFT_69899 I 0.000
M422DRAFT_89155 Sphaerobolus stellatus M422DRAFT_89155 I 0.000
Moror_17490 Moniliophthora roreri Moror_17490 I 0.000
Moror_2098 Moniliophthora roreri Moror_2098 I 0.000
PAXRUDRAFT_106123 Paxillus rubicundulus PAXRUDRAFT_106123 I 0.000
PGTG_06975 Puccinia graminis PGTG_06975 I 0.000
PISMIDRAFT_31667 Pisolithus microcarpus PISMIDRAFT_31667 I 0.000
SCHCODRAFT_111770 Schizophyllum commune SCHCODRAFT_111770 I 0.000
SCHCODRAFT_113446 Schizophyllum commune SCHCODRAFT_113446 I 0.000
SCHCODRAFT_114945 Schizophyllum commune SCHCODRAFT_114945 I 0.000
SCHCODRAFT_238903 Schizophyllum commune SCHCODRAFT_238903 I 0.000
gw1.11.527.1 Heterobasidion annosum gw1.11.527.1 I 0.000
gw1.11.531.1 Heterobasidion annosum gw1.11.531.1 I 0.000
gw1.15.231.1 Heterobasidion annosum gw1.15.231.1 I 0.000
KLTH0F13926g Kluyveromyces thermotolerans KLTH0F13926g I 0.000
Kwal_21061 Kluyveromyces waltii Kwal_21061 I 0.000
M404DRAFT_56218 Pisolithus tinctorius M404DRAFT_56218 I 0.000
M378DRAFT_177991 Amanita muscaria M378DRAFT_177991 I 0.000
KLTH0F13926g Lachancea thermotolerans KLTH0F13926g I 0.000
AGOS_AAR026W Ashbya gossypii AGOS_AAR026W I 0.000
CC1G_08141 Coprinopsis cinerea CC1G_08141 I 0.000
CY34DRAFT_28710 Suillus luteus CY34DRAFT_28710 I 0.000
Ecym_1257 Eremothecium cymbalariae Ecym_1257 I 0.000
ENSPMAG00000009255 Petromyzon marinus ENSPMAG00000009255 I 0.000
FIBRA_04233 Fibroporia radiculosa FIBRA_04233 I 0.000
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I 0.000
GALMADRAFT_33159 Galerina marginata GALMADRAFT_33159 I 0.000
HETIRDRAFT_18788 Heterobasidion irregulare HETIRDRAFT_18788 I 0.000
GLOTRDRAFT_28355 Gloeophyllum trabeum GLOTRDRAFT_28355 I 0.000
HETIRDRAFT_18754 Heterobasidion irregulare HETIRDRAFT_18754 I 0.000
HETIRDRAFT_18769 Heterobasidion irregulare HETIRDRAFT_18769 I 0.000
K437DRAFT_265905 Tilletiaria anomala K437DRAFT_265905 I 0.000
ACRE_020880 Acremonium chrysogenum ACRE_020880 N 0.000
AGABI2DRAFT_56847 Agaricus bisporus AGABI2DRAFT_56847 N 0.000
M408DRAFT_22846 Serendipita vermifera M408DRAFT_22846 N 0.000
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N 0.000
HETIRDRAFT_18749 Heterobasidion irregulare HETIRDRAFT_18749 N 0.000
FOMPIDRAFT_1124101 Fomitopsis pinicola FOMPIDRAFT_1124101 N 0.000