PATZ1 (Meleagris gallopavo)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMGAG00000008439 T098166_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PATZ1
M08287_2.00 		Homo sapiens
CCCCDCCC
GGGHGGGG		 ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME 		0.824 0.985
PATZ1
M08864_2.00 		Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN		 Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C 		0.824 0.985
PATZ1
M10137_2.00 		Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN		 Transfac
Matys et al.(2006)
V$MAZR_01 		0.824 0.985
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000008656 C2H2 ZF 163 185
ENSMGAP00000008656 C2H2 ZF 227 248
ENSMGAP00000008656 C2H2 ZF 254 276
ENSMGAP00000008656 C2H2 ZF 284 307
ENSMGAP00000008656 C2H2 ZF 313 335
ENSMGAP00000008656 C2H2 ZF 367 389

Links

Other C2H2 ZF family TFs
Other Meleagris gallopavo TFs

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36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action