CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PATZ1
(
Microcebus murinus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMICG00000005430
T098400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PATZ1
M08287_2.00
Homo sapiens
CCCCDCCC
GGGHGGGG
ChIP-seq
Schmitges et al.(2016)
Q9HBE1.MEME
0.827
1.000
PATZ1
M08864_2.00
Homo sapiens
NYBCHNBYBCMKYCYCYBCCMY
RKGGVRGRGRMKGVRVNDGVRN
Misc
Kulakovskiy et al.(2013)
PATZ1_HUMAN.H11MO.0.C
0.827
1.000
PATZ1
M10137_2.00
Homo sapiens
NDDCCCCCCCCSH
DSGGGGGGGGHHN
Transfac
Matys et al.(2006)
V$MAZR_01
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000004956
C2H2 ZF
225
247
LPCGLCGKVFTDANRLRQHEAQH
ENSMICP00000004956
C2H2 ZF
289
310
ACEICGKIFRDVYHLNRHKLSH
ENSMICP00000004956
C2H2 ZF
316
338
YSCPVCGLRFKRKDRMSYHVRSH
ENSMICP00000004956
C2H2 ZF
346
369
YICQSCGKGFSRPDHLNGHIKQVH
ENSMICP00000004956
C2H2 ZF
375
397
HKCQTCNASFATRDRLRSHLACH
ENSMICP00000004956
C2H2 ZF
429
451
FCSICNRGFSSASYLKVHVKTHH
Links
Other
C2H2 ZF
family TFs
Other
Microcebus murinus
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy