PRDM4 (Microcebus murinus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMICG00000007807 T098459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM4
M02881_2.00
Homo sapiens
TTTCAAGGCCCCC

GGGGGCCTTGAAA
SELEX
Jolma et al.(2013)
PRDM4_1
0.802 0.978
PRDM4
M04421_2.00
Homo sapiens
YRRCNGTTTCAAGKCYMCCC

GGGKRGMCTTGAAACNGYYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX
0.802 0.978
PRDM4
M04422_2.00
Homo sapiens
YRGCRGTTTCRAGGSTTVCC

GGBAASCCTYGAAACYGCYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1
0.802 0.978
PRDM4
M04423_2.00
Homo sapiens
YRRCRGTTTCRAGKSYNCCC

GGGNRSMCTYGAAACYGYYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2
0.802 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000007100 C2H2 ZF 590 612
ENSMICP00000007100 C2H2 ZF 618 640
ENSMICP00000007100 C2H2 ZF 646 668
ENSMICP00000007100 C2H2 ZF 674 696
ENSMICP00000007100 C2H2 ZF 702 724
ENSMICP00000007100 C2H2 ZF 730 751

Links

Other C2H2 ZF family TFs
Other Microcebus murinus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRDM4 Otolemur garnettii ENSOGAG00000011945 I 0.802
PRDM4 Ochotona princeps ENSOPRG00000010192 I 0.802
ENSPANG00000022084 Papio anubis ENSPANG00000022084 I 0.802
ENSOARG00000017955 Ovis aries ENSOARG00000017955 I 0.802
ENSNLEG00000006748 Nomascus leucogenys ENSNLEG00000006748 I 0.802
PRDM4 Macaca mulatta ENSMMUG00000015550 I 0.802
ENSMPUG00000012238 Mustela putorius furo ENSMPUG00000012238 I 0.802
Prdm4 Mus musculus ENSMUSG00000035529 I 0.802
PRDM4 Procavia capensis ENSPCAG00000009987 I 0.802
ENSPPYG00000004913 Pongo abelii ENSPPYG00000004913 I 0.802
PRDM4 Tursiops truncatus ENSTTRG00000011056 I 0.802
PRDM4 Vicugna pacos ENSVPAG00000002215 I 0.802
ENSP00000228437-D1 Bos grunniens ENSP00000228437-D1 I 0.802
ENSSTOG00000016168 Ictidomys tridecemlineatus ENSSTOG00000016168 I 0.802
PRDM4 Sus scrofa ENSSSCG00000000160 I 0.802
ENSP00000228437 Macaca fascicularis ENSP00000228437 I 0.802
PRDM4 Pan troglodytes ENSPTRG00000005400 I 0.802
PRDM4 Myotis lucifugus ENSMLUG00000000767 I 0.802
Myotis_brandtii_PRDM4_10020406 Myotis brandtii Myotis_brandtii_PRDM4_10020406 I 0.802
PRDM4 Dasypus novemcinctus ENSDNOG00000032478 I 0.802
PRDM4 Equus caballus ENSECAG00000015423 I 0.802
PRDM4 Callithrix jacchus ENSCJAG00000015261 I 0.802
PRDM4 Canis familiaris ENSCAFG00000001788 I 0.802
ENSAMEG00000016174 Ailuropoda melanoleuca ENSAMEG00000016174 I 0.802
PRDM4 Bos taurus ENSBTAG00000012999 I 0.802
PRDM4 Felis catus ENSFCAG00000022478 I 0.802
ENSCSAG00000002896 Chlorocebus sabaeus ENSCSAG00000002896 I 0.802
PRDM4 Homo sapiens ENSG00000110851 D 0.802
PRDM4 Loxodonta africana ENSLAFG00000001483 I 0.802
PRDM4 Gorilla gorilla ENSGGOG00000001244 I 0.802
Prdm4 Rattus norvegicus ENSRNOG00000004962 I 0.799
PRDM4 Choloepus hoffmanni ENSCHOG00000001744 I 0.798
ENSCPOG00000022385 Cavia porcellus ENSCPOG00000022385 I 0.797
Aan_R008654 Calypte anna Aan_R008654 I 0.796
ENSAPLG00000009846 Anas platyrhynchos ENSAPLG00000009846 I 0.796
Afo_R011067 Aptenodytes forsteri Afo_R011067 I 0.796
Pvit_09756 Pogona vitticeps Pvit_09756 I 0.796
Brh_R007685 Buceros rhinoceros Brh_R007685 I 0.796
ENSFALG00000013342 Ficedula albicollis ENSFALG00000013342 I 0.796
ENSTGUG00000010962 Taeniopygia guttata ENSTGUG00000010962 I 0.796
Tal_R009708 Tyto alba Tal_R009708 I 0.796
Gfo_R004636 Geospiza fortis Gfo_R004636 I 0.796
ENSTGUG00000015149 Taeniopygia guttata ENSTGUG00000015149 I 0.796
PRDM4 Meleagris gallopavo ENSMGAG00000012815 I 0.796
PRDM4 Gallus gallus ENSGALG00000012619 I 0.796
Cmyd_10007196 Chelonia mydas Cmyd_10007196 I 0.794
PRDM4 Ornithorhynchus anatinus ENSOANG00000005526 I 0.794
PRDM4 Monodelphis domestica ENSMODG00000001448 I 0.794
Alligator_sinensis_CCG012513.1 Alligator sinensis Alligator_sinensis_CCG012513.1 I 0.794
ENSPSIG00000012066 Pelodiscus sinensis ENSPSIG00000012066 I 0.794
ENSMEUG00000004495 Macropus eugenii ENSMEUG00000004495 I 0.794
PRDM4 Anolis carolinensis ENSACAG00000014907 I 0.788
PRDM4 Erinaceus europaeus ENSEEUG00000006569 I 0.760