CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF454
(
Myotis lucifugus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMLUG00000002894
T098760_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.818
0.978
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.818
0.978
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.818
0.978
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.818
0.978
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.818
0.978
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.818
0.978
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.818
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000002625
C2H2 ZF
174
196
FDCSECGKVFTKSSTLNKHQKIH
ENSMLUP00000002625
C2H2 ZF
213
235
YKCRECGKAFHQSTHLIHHQRIH
ENSMLUP00000002625
C2H2 ZF
241
263
YECKECGKAFSVSSSLTYHQKIH
ENSMLUP00000002625
C2H2 ZF
269
291
FECNLCGKAFIRNIHLAHHHRIH
ENSMLUP00000002625
C2H2 ZF
297
319
FKCNICDKAFVCRAHLTKHQNIH
ENSMLUP00000002625
C2H2 ZF
325
347
YKCNECGKAFNQSTSFLQHQRIH
ENSMLUP00000002625
C2H2 ZF
353
375
FECNECGKAFRVNSSLTEHQRIH
ENSMLUP00000002625
C2H2 ZF
381
403
YKCNECGKAFRDNSSFARHRKIH
ENSMLUP00000002625
C2H2 ZF
409
431
YRCGLCEKAFRDQSALAQHQRIH
ENSMLUP00000002625
C2H2 ZF
437
459
YTCNICEKAFSDHSALTQHKRIH
ENSMLUP00000002625
C2H2 ZF
465
487
YKCKICGKAFIRSTHLTQHQRIH
ENSMLUP00000002625
C2H2 ZF
493
515
YKCNKCGKAFNQTANLIQHQKHH
ENSMLUP00000015056
C2H2 ZF
144
166
FDCSECGKVFTKSSTLNKHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Myotis lucifugus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy