CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF248
(
Myotis lucifugus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMLUG00000003873
T098780_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF248
M07739_2.00
Homo sapiens
NYNTYVMTGRAYATDGKHHDY
RHDDMCHATRTYCAKBRANRN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF248.RCADE.OriginalMapping
0.812
0.944
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000003525
C2H2 ZF
375
397
FECAECGKTFWEKSNLTQHQRTH
ENSMLUP00000003525
C2H2 ZF
403
425
YECAECGKSFCQKPHLTNHQRTH
ENSMLUP00000003525
C2H2 ZF
431
453
YECNQCGKTFCVKSNLTEHHRTH
ENSMLUP00000003525
C2H2 ZF
459
481
YECNTCGKSFCHRSALTVHQRTH
ENSMLUP00000003525
C2H2 ZF
487
509
FICNECGKSFCVKSNLIVHQRTH
ENSMLUP00000003525
C2H2 ZF
515
537
YQCNECGKTFCEKSALTKHLRTH
ENSMLUP00000003525
C2H2 ZF
543
565
YECNGCGKTFSQRSVLTKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Myotis lucifugus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy