CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Myotis lucifugus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMLUG00000013294
T098920_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.822
0.987
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.822
0.987
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.822
0.987
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.775
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000012094
C2H2 ZF
162
184
YKCSICEKTFINTSSLRKHEKNH
ENSMLUP00000012094
C2H2 ZF
190
212
FKCKECSKAFNQSSALIQHQITH
ENSMLUP00000012094
C2H2 ZF
218
240
YVCKECGKAFTLSTSLYKHLRTH
ENSMLUP00000012094
C2H2 ZF
246
268
YRCKECGKSFSRRSGLFIHQKIH
ENSMLUP00000012094
C2H2 ZF
302
324
YLCNECGNTFKSSSSLRYHQRIH
ENSMLUP00000012094
C2H2 ZF
330
352
FKCSECGRAFSQSASLIQHERIH
ENSMLUP00000012094
C2H2 ZF
358
380
YRCNECGKGFTSISRLNRHRIIH
ENSMLUP00000012094
C2H2 ZF
386
408
YNCSECGKALSSHSTLIIHERIH
ENSMLUP00000012094
C2H2 ZF
414
436
CKCKVCGKAFRQSSALIQHQRMH
ENSMLUP00000012094
C2H2 ZF
442
464
YKCNECGKTFRCNSSLSNHQRIH
ENSMLUP00000012094
C2H2 ZF
470
492
YRCEECGISFGQSSALIQHRRIH
ENSMLUP00000012094
C2H2 ZF
498
520
FKCNTCGKTFRQSSSRIAHQRIH
ENSMLUP00000012094
C2H2 ZF
526
548
YECNTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Myotis lucifugus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy