ZNF550 (Macaca mulatta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMMUG00000006122 T099212_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF550
M07772_2.00 		Homo sapiens
TGCCYTAGCMBWSRYTYY
RRARYSWVKGCTARGGCA		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping 		0.827 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000008048 C2H2 ZF 157 179
ENSMMUP00000008048 C2H2 ZF 185 207
ENSMMUP00000008048 C2H2 ZF 213 235
ENSMMUP00000008048 C2H2 ZF 241 263
ENSMMUP00000008048 C2H2 ZF 269 291
ENSMMUP00000008048 C2H2 ZF 297 319
ENSMMUP00000008048 C2H2 ZF 325 347
ENSMMUP00000008048 C2H2 ZF 353 375
ENSMMUP00000031401 C2H2 ZF 198 220
ENSMMUP00000031401 C2H2 ZF 226 248
ENSMMUP00000031401 C2H2 ZF 254 276
ENSMMUP00000031401 C2H2 ZF 282 304
ENSMMUP00000031401 C2H2 ZF 310 332
ENSMMUP00000031401 C2H2 ZF 338 360
ENSMMUP00000031401 C2H2 ZF 366 388
ENSMMUP00000031401 C2H2 ZF 394 416

Links

Other C2H2 ZF family TFs
Other Macaca mulatta TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSNLEG00000010977 Nomascus leucogenys ENSNLEG00000010977 I 0.827
ZNF550 Pan troglodytes ENSPTRG00000011560 I 0.827
ENSMMUP00000031401 Macaca fascicularis ENSMMUP00000031401 I 0.827
ZNF550 Gorilla gorilla ENSGGOG00000014068 I 0.827
ZNF550 Homo sapiens ENSG00000251369 D 0.827
ENSCSAG00000001629 Chlorocebus sabaeus ENSCSAG00000001629 I 0.827
ENSTSYG00000004591 Tarsius syrichta ENSTSYG00000004591 I 0.819
ENSAMEG00000004910 Ailuropoda melanoleuca ENSAMEG00000004910 I 0.817
ZNF550 Canis familiaris ENSCAFG00000002421 I 0.817
ZNF550 Callithrix jacchus ENSCJAG00000000044 I 0.816
ENSMPUG00000006298 Mustela putorius furo ENSMPUG00000006298 I 0.812
ZNF550 Tursiops truncatus ENSTTRG00000000293 I 0.800
ENSOARG00000003673 Ovis aries ENSOARG00000003673 I 0.784