ZNF550 (Macaca mulatta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMMUG00000006122 T099212_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF550
M07772_2.00
Homo sapiens
TGCCYTAGCMBWSRYTYY

RRARYSWVKGCTARGGCA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF550.RCADE.OriginalMapping
0.827 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000008048 C2H2 ZF 157 179
ENSMMUP00000008048 C2H2 ZF 185 207
ENSMMUP00000008048 C2H2 ZF 213 235
ENSMMUP00000008048 C2H2 ZF 241 263
ENSMMUP00000008048 C2H2 ZF 269 291
ENSMMUP00000008048 C2H2 ZF 297 319
ENSMMUP00000008048 C2H2 ZF 325 347
ENSMMUP00000008048 C2H2 ZF 353 375
ENSMMUP00000031401 C2H2 ZF 198 220
ENSMMUP00000031401 C2H2 ZF 226 248
ENSMMUP00000031401 C2H2 ZF 254 276
ENSMMUP00000031401 C2H2 ZF 282 304
ENSMMUP00000031401 C2H2 ZF 310 332
ENSMMUP00000031401 C2H2 ZF 338 360
ENSMMUP00000031401 C2H2 ZF 366 388
ENSMMUP00000031401 C2H2 ZF 394 416

Links

Other C2H2 ZF family TFs
Other Macaca mulatta TFs

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14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action