BCL6B (Macaca mulatta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMMUG00000016268 T099463_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM

KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.827 1.000
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN

NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.827 1.000
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN

NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.827 1.000
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN

NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.827 1.000
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN

NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.827 1.000
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN

NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.818 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000021377 C2H2 ZF 323 345
ENSMMUP00000021377 C2H2 ZF 351 373
ENSMMUP00000021377 C2H2 ZF 379 401
ENSMMUP00000021377 C2H2 ZF 407 429
ENSMMUP00000021377 C2H2 ZF 435 458

Links

Other C2H2 ZF family TFs
Other Macaca mulatta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.000
MDP0000669451 Malus domestica MDP0000669451 I 0.000
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.000
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.000
Ca_13295 Cicer arietinum Ca_13295 I 0.000
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.000
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.000
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.000
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.000
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.000
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.000
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.000
Pm014329 Prunus mume Pm014329 I 0.000
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.000
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.000
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.000
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.000
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.000
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.000
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.000
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.000
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.000
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.000
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.000
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.000
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.000
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.000
PK14700.1 Cannabis sativa PK14700.1 N 0.000
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.000
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.000
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.000
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.000
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.000
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.000
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.000
MDP0000237978 Malus domestica MDP0000237978 N 0.000
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.000
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.000
mgf025772m Mimulus guttatus mgf025772m N 0.000
mgf008289m Mimulus guttatus mgf008289m N 0.000
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.000
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.000
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.000
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.000
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.000
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.000
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.000
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.000
Bra017443 Brassica rapa Bra017443 N 0.000
Bo9g070200 Brassica oleracea Bo9g070200 N 0.000
Bo7g078550 Brassica oleracea Bo7g078550 N 0.000
RGA Arabidopsis thaliana AT2G01570 N 0.000
GAI Arabidopsis thaliana AT1G14920 N 0.000
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.000
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.000
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.000
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.000
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.000
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.000
29692.m000540 Ricinus communis 29692.m000540 N 0.000
28677.m000055 Ricinus communis 28677.m000055 N 0.000
Pm006304 Prunus mume Pm006304 N 0.000
Cla020062 Citrullus lanatus Cla020062 N 0.000
Cla003996 Citrullus lanatus Cla003996 N 0.000
Ca_05046 Cicer arietinum Ca_05046 N 0.000
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.000
TCM_019165 Theobroma cacao TCM_019165 N 0.000
TCM_010965 Theobroma cacao TCM_010965 N 0.000
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.000