ZSCAN9 (Monodelphis domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMODG00000008321 T099896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN23
M04613_2.00
Homo sapiens
NYCATGTGCTAATTACAVN

NBTGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX
0.788 0.922
ZSCAN23
M04614_2.00
Homo sapiens
NYCATGTGCTAATTACRHN

NDYGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX
0.788 0.922
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000030624 C2H2 ZF 243 265
ENSMODP00000030624 C2H2 ZF 271 293
ENSMODP00000030624 C2H2 ZF 299 321
ENSMODP00000030624 C2H2 ZF 327 349
ENSMODP00000030624 C2H2 ZF 355 377

Links

Other C2H2 ZF family TFs
Other Monodelphis domestica TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZSCAN23 Bos taurus ENSBTAG00000037965 I 0.768
ZSCAN23 Canis familiaris ENSCAFG00000024985 I 0.762
ZSCAN23 Choloepus hoffmanni ENSCHOG00000004064 I 0.775
ZSCAN23 Callithrix jacchus ENSCJAG00000018616 I 0.786
ENSCSAG00000008044 Chlorocebus sabaeus ENSCSAG00000008044 I 0.790
ZSCAN23 Equus caballus ENSECAG00000016879 I 0.788
ENSEEUG00000006981 Erinaceus europaeus ENSEEUG00000006981 I 0.788
ZSCAN23 Homo sapiens ENSG00000187987 D 0.788
ZSCAN23 Gorilla gorilla ENSGGOG00000024543 I 0.788
ZSCAN23 Microcebus murinus ENSMICG00000010510 I 0.786
ZSCAN23 Macaca mulatta ENSMMUG00000012396 I 0.790
ENSMPUG00000001273 Mustela putorius furo ENSMPUG00000001273 I 0.772
ENSNLEG00000004577 Nomascus leucogenys ENSNLEG00000004577 I 0.788
ZSCAN23 Oryctolagus cuniculus ENSOCUG00000029301 I 0.767
ZSCAN23 Otolemur garnettii ENSOGAG00000006605 I 0.788
ENSP00000289788 Macaca fascicularis ENSP00000289788 I 0.790
ENSPANG00000012448 Papio anubis ENSPANG00000012448 I 0.790
ZSCAN23 Procavia capensis ENSPCAG00000015061 I 0.761
ENSPPYG00000016373 Pongo abelii ENSPPYG00000016373 I 0.788
ZSCAN23 Pan troglodytes ENSPTRG00000017876 I 0.788
ZSCAN23 Sorex araneus ENSSARG00000008482 I 0.763
ENSSTOG00000004477 Ictidomys tridecemlineatus ENSSTOG00000004477 I 0.781
ENSTSYG00000000711 Tarsius syrichta ENSTSYG00000000711 I 0.784
ZSCAN23 Tursiops truncatus ENSTTRG00000015648 I 0.779
ZSCAN23 Vicugna pacos ENSVPAG00000000043 I 0.779