CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bcl6b
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000000317
T100968_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.818
0.983
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.818
0.983
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.818
0.983
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.818
0.983
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.818
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00128_2.00
C2H2 ZF
16
38
YKCQLCRSAFRYKGNLASHRTVH
M00128_2.00
C2H2 ZF
44
66
YRCSICGARFNRPANLKTHSRIH
M00128_2.00
C2H2 ZF
72
94
YKCETCGSRFVQVAHLRAHVLIH
M00128_2.00
C2H2 ZF
100
122
YPCPTCGTRFRHLQTLKSHVRIH
M00128_2.00
C2H2 ZF
128
151
YHCDPCGLHFRHKSQLRLHLRQKH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000000326
C2H2 ZF
323
345
YKCQLCRSAFRYKGNLASHRTVH
ENSMUSP00000000326
C2H2 ZF
351
373
YRCSICGARFNRPANLKTHSRIH
ENSMUSP00000000326
C2H2 ZF
379
401
YKCETCGSRFVQVAHLRAHVLIH
ENSMUSP00000000326
C2H2 ZF
407
429
YPCPTCGTRFRHLQTLKSHVRIH
ENSMUSP00000000326
C2H2 ZF
435
458
YHCDPCGLHFRHKSQLRLHLRQKH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BCL6B
Ochotona princeps
ENSOPRG00000006070
I
0.827
Bcl6b
Rattus norvegicus
ENSRNOG00000059956
I
0.825
ENSAMEG00000016319
Ailuropoda melanoleuca
ENSAMEG00000016319
I
0.818
ENSNLEG00000009340
Nomascus leucogenys
ENSNLEG00000009340
I
0.818
BCL6B
Tupaia belangeri
ENSTBEG00000005792
I
0.818
ENSMPUG00000010670
Mustela putorius furo
ENSMPUG00000010670
I
0.818
ENSSTOG00000006365
Ictidomys tridecemlineatus
ENSSTOG00000006365
I
0.818
BCL6B
Sus scrofa
ENSSSCG00000017927
I
0.818
BCL6B
Pan troglodytes
ENSPTRG00000008656
I
0.818
ENSPPYG00000007891
Pongo abelii
ENSPPYG00000007891
I
0.818
BCL6B
Procavia capensis
ENSPCAG00000013548
I
0.818
ENSPANG00000024201
Papio anubis
ENSPANG00000024201
I
0.818
BCL6B
Macaca mulatta
ENSMMUG00000016268
I
0.818
ENSMLUG00000003564
Myotis lucifugus
ENSMLUG00000003564
I
0.818
ENSCSAG00000012171
Chlorocebus sabaeus
ENSCSAG00000012171
I
0.818
ENSP00000293805
Macaca fascicularis
ENSP00000293805
I
0.818
BCL6B
Cavia porcellus
ENSCPOG00000004066
I
0.818
Myotis_brandtii_BCL6B_10021005
Myotis brandtii
Myotis_brandtii_BCL6B_10021005
I
0.818
BCL6B
Bos taurus
ENSBTAG00000020854
I
0.818
Bcl6b
Dipodomys ordii
ENSDORG00000005538
I
0.818
BCL6B
Equus caballus
ENSECAG00000023771
I
0.818
BCL6B
Gorilla gorilla
ENSGGOG00000009787
I
0.818
ENSP00000293805-D1
Bos grunniens
ENSP00000293805-D1
I
0.818
BCL6B
Homo sapiens
ENSG00000161940
D
0.818
BCL6B
Loxodonta africana
ENSLAFG00000006642
I
0.818
ENSOARG00000009610
Ovis aries
ENSOARG00000009610
I
0.816
BCL6B
Otolemur garnettii
ENSOGAG00000027908
I
0.815
BCL6B
Canis familiaris
ENSCAFG00000015968
I
0.813
ENSPSIG00000013071
Pelodiscus sinensis
ENSPSIG00000013071
I
0.812
BCL6B
Dasypus novemcinctus
ENSDNOG00000035586
I
0.812
ENSSHAG00000000166
Sarcophilus harrisii
ENSSHAG00000000166
I
0.811
ENSMEUG00000000375
Macropus eugenii
ENSMEUG00000000375
I
0.811
BCL6B
Monodelphis domestica
ENSMODG00000006161
I
0.809
BCL6B
Tursiops truncatus
ENSTTRG00000003982
I
0.803
bcl6ab
Takifugu rubripes
ENSTRUG00000001788
I
0.802
bcl6ab
Tetraodon nigroviridis
ENSTNIG00000007834
I
0.802
Alligator_sinensis_CCG005035.1
Alligator sinensis
Alligator_sinensis_CCG005035.1
I
0.794
bcl6ab
Oryzias latipes
ENSORLG00000004563
I
0.792