Bcl6b (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000000317 T100968_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN

NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM

KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.818 0.983
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN

NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.818 0.983
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN

NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.818 0.983
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN

NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.818 0.983
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN

NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.818 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00128_2.00 C2H2 ZF 16 38
M00128_2.00 C2H2 ZF 44 66
M00128_2.00 C2H2 ZF 72 94
M00128_2.00 C2H2 ZF 100 122
M00128_2.00 C2H2 ZF 128 151

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000000326 C2H2 ZF 323 345
ENSMUSP00000000326 C2H2 ZF 351 373
ENSMUSP00000000326 C2H2 ZF 379 401
ENSMUSP00000000326 C2H2 ZF 407 429
ENSMUSP00000000326 C2H2 ZF 435 458

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BCL6B Ochotona princeps ENSOPRG00000006070 I 0.827
Bcl6b Rattus norvegicus ENSRNOG00000059956 I 0.825
ENSAMEG00000016319 Ailuropoda melanoleuca ENSAMEG00000016319 I 0.818
ENSNLEG00000009340 Nomascus leucogenys ENSNLEG00000009340 I 0.818
BCL6B Tupaia belangeri ENSTBEG00000005792 I 0.818
ENSMPUG00000010670 Mustela putorius furo ENSMPUG00000010670 I 0.818
ENSSTOG00000006365 Ictidomys tridecemlineatus ENSSTOG00000006365 I 0.818
BCL6B Sus scrofa ENSSSCG00000017927 I 0.818
BCL6B Pan troglodytes ENSPTRG00000008656 I 0.818
ENSPPYG00000007891 Pongo abelii ENSPPYG00000007891 I 0.818
BCL6B Procavia capensis ENSPCAG00000013548 I 0.818
ENSPANG00000024201 Papio anubis ENSPANG00000024201 I 0.818
BCL6B Macaca mulatta ENSMMUG00000016268 I 0.818
ENSMLUG00000003564 Myotis lucifugus ENSMLUG00000003564 I 0.818
ENSCSAG00000012171 Chlorocebus sabaeus ENSCSAG00000012171 I 0.818
ENSP00000293805 Macaca fascicularis ENSP00000293805 I 0.818
BCL6B Cavia porcellus ENSCPOG00000004066 I 0.818
Myotis_brandtii_BCL6B_10021005 Myotis brandtii Myotis_brandtii_BCL6B_10021005 I 0.818
BCL6B Bos taurus ENSBTAG00000020854 I 0.818
Bcl6b Dipodomys ordii ENSDORG00000005538 I 0.818
BCL6B Equus caballus ENSECAG00000023771 I 0.818
BCL6B Gorilla gorilla ENSGGOG00000009787 I 0.818
ENSP00000293805-D1 Bos grunniens ENSP00000293805-D1 I 0.818
BCL6B Homo sapiens ENSG00000161940 D 0.818
BCL6B Loxodonta africana ENSLAFG00000006642 I 0.818
ENSOARG00000009610 Ovis aries ENSOARG00000009610 I 0.816
BCL6B Otolemur garnettii ENSOGAG00000027908 I 0.815
BCL6B Canis familiaris ENSCAFG00000015968 I 0.813
ENSPSIG00000013071 Pelodiscus sinensis ENSPSIG00000013071 I 0.812
BCL6B Dasypus novemcinctus ENSDNOG00000035586 I 0.812
ENSSHAG00000000166 Sarcophilus harrisii ENSSHAG00000000166 I 0.811
ENSMEUG00000000375 Macropus eugenii ENSMEUG00000000375 I 0.811
BCL6B Monodelphis domestica ENSMODG00000006161 I 0.809
BCL6B Tursiops truncatus ENSTTRG00000003982 I 0.803
bcl6ab Takifugu rubripes ENSTRUG00000001788 I 0.802
bcl6ab Tetraodon nigroviridis ENSTNIG00000007834 I 0.802
Alligator_sinensis_CCG005035.1 Alligator sinensis Alligator_sinensis_CCG005035.1 I 0.794
bcl6ab Oryzias latipes ENSORLG00000004563 I 0.792