Snai3 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000006587 T100988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SNAI3
M04607_2.00
Homo sapiens
YRCACCTGYH

DRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX
0.793 0.885
SNAI3
M04608_2.00
Homo sapiens
YVCACCTGYH

DRCAGGTGBR
SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX
0.793 0.885
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000006762 C2H2 ZF 147 169
ENSMUSP00000006762 C2H2 ZF 178 200
ENSMUSP00000006762 C2H2 ZF 204 226
ENSMUSP00000006762 C2H2 ZF 232 254
ENSMUSP00000006762 C2H2 ZF 260 280

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

Invalid Input OrderBy

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action