Zkscan6 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000018347 T101003_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY

RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.803 0.947
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN

NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.803 0.947
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY

RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.803 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000018491 C2H2 ZF 416 437
ENSMUSP00000018491 C2H2 ZF 443 465
ENSMUSP00000018491 C2H2 ZF 471 493
ENSMUSP00000018491 C2H2 ZF 499 521
ENSMUSP00000018491 C2H2 ZF 527 549
ENSMUSP00000071406 C2H2 ZF 416 437
ENSMUSP00000071406 C2H2 ZF 443 465
ENSMUSP00000071406 C2H2 ZF 471 493
ENSMUSP00000071406 C2H2 ZF 499 521
ENSMUSP00000071406 C2H2 ZF 527 549

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh2_kg.7__1722__AT4G25400.1 Arabidopsis lyrata fgenesh2_kg.7__1722__AT4G25400.1 I 0.000
Pm019418 Prunus mume Pm019418 N 0.000
MDP0000652631 Malus domestica MDP0000652631 N 0.000
MDP0000866611 Malus domestica MDP0000866611 N 0.000