Yy1 (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000021264 T101020_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Yy1
M08971_2.00
Mus musculus
GCCGCCATBTTB

VAAVATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_MOUSE.H11MO.0.A
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YY1
M02877_2.00
Homo sapiens
NVSRCCATNDH

DHNATGGYSBN
SELEX
Jolma et al.(2013)
YY1_1
0.827 1.000
YY1
M04406_2.00
Homo sapiens
NDCCATYTTKRRBNDWNHGTGCK

MGCACDNWHNVYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_1
0.827 1.000
YY1
M04407_2.00
Homo sapiens
NKMCGCCATYTTGN

NCAARATGGCGKMN
SELEX
Yin et al.(2017)
YY1_FL_HT-SELEX_2
0.827 1.000
YY1
M05845_2.00
Homo sapiens
NNNVGCCATNWYD

HRWNATGGCBNNN
SMiLE-seq
Isakova et al.(2017)
YY1
0.827 1.000
YY1
M08288_2.00
Homo sapiens
GCCGCCATBKYB

VRMVATGGCGGC
ChIP-seq
Schmitges et al.(2016)
P25490_1-4.RCADE
0.827 1.000
YY1
M08085_2.00
Homo sapiens
KCVGCCATBTTK

MAAVATGGCBGM
ChIP-seq
Mathelier et al.(2014)
MA0095.2
0.827 1.000
YY1
M07855_2.00
Homo sapiens
VNVGCCGCCATBTTK

MAAVATGGCGGCBNB
ChIP-seq
Gerstein et al.(2012)
GM12878_YY1_HudsonAlpha
0.827 1.000
YY1
M07856_2.00
Homo sapiens
GCSGCCATBTT

AAVATGGCSGC
ChIP-seq
Gerstein et al.(2012)
GM12891_YY1_HudsonAlpha
0.827 1.000
YY1
M07857_2.00
Homo sapiens
BSNVGCSGCCATBTT

AAVATGGCSGCBNSV
ChIP-seq
Gerstein et al.(2012)
GM12892_YY1_HudsonAlpha
0.827 1.000
YY1
M07858_2.00
Homo sapiens
NNVGCSGCCATBTTK

MAAVATGGCSGCBNN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_YY1_HudsonAlpha
0.827 1.000
YY1
M07859_2.00
Homo sapiens
SBSGCSGCCATBTTK

MAAVATGGCSGCSVS
ChIP-seq
Gerstein et al.(2012)
K562b_YY1_UCD
0.827 1.000
YY1
M07860_2.00
Homo sapiens
GCCGCCATBTTKNNN

NNNMAAVATGGCGGC
ChIP-seq
Gerstein et al.(2012)
K562_YY1_HudsonAlpha
0.827 1.000
YY1
M07861_2.00
Homo sapiens
VGCSGCCATBTTK

MAAVATGGCSGCB
ChIP-seq
Gerstein et al.(2012)
NT2-D1_YY1_UCD
0.827 1.000
YY1
M08237_2.00
Homo sapiens
VNVGCVGCCATBTTD

HAAVATGGCBGCBNB
ChIP-seq
Najafabadi et al.(2015b)
YY1
0.827 1.000
YY1
M08865_2.00
Homo sapiens
GCCGCCATYTTK

MAARATGGCGGC
Misc
Kulakovskiy et al.(2013)
TYY1_HUMAN.H11MO.0.A
0.827 1.000
YY1
M10138_2.00
Homo sapiens
NVNNDCCATNTWNNVWN

NWBNNWANATGGHNNBN
Transfac
Matys et al.(2006)
V$YY1_01
0.827 1.000
YY1
M10139_2.00
Homo sapiens
NNNSBGCCATCTDSNHTSND

HNSADNSHAGATGGCVSNNN
Transfac
Matys et al.(2006)
V$YY1_02
0.827 1.000
YY1
M10140_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_03
0.827 1.000
YY1
M10141_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_07
0.827 1.000
YY1
M10142_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_08
0.827 1.000
YY1
M10143_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q4_01
0.827 1.000
YY1
M10144_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_02
0.827 1.000
YY1
M10145_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6_03
0.827 1.000
YY1
M10146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY1_Q6
0.827 1.000
YY1
M04408_2.00
Homo sapiens
NDCCATYTTKRRCDDWWHGTGCY

RGCACDWWHHGYYMAARATGGHN
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_1
0.827 1.000
YY1
M04409_2.00
Homo sapiens
RKCSGCCATYTTGD

HCAARATGGCSGMY
SELEX
Yin et al.(2017)
YY1_FL_Methyl-HT-SELEX_2
0.827 1.000
TYY2_RAT
M10385_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YY2
0.816 0.912
pho
M06053_2.00
Drosophila melanogaster
KNVGCCATDAHNSY

RSNDTHATGGCBNM
B1H
Zhu et al.(2011)
pho_FlyReg_FBgn0002521
0.809 0.945
pho
M06054_2.00
Drosophila melanogaster
KCCGCCATHWTK

MAWDATGGCGGM
B1H
Zhu et al.(2011)
pho_SANGER_10_FBgn0002521
0.809 0.945
pho
M06055_2.00
Drosophila melanogaster
NKBCGCCATHWTKNN

NNMAWDATGGCGVMN
B1H
Zhu et al.(2011)
pho_SOLEXA_5_FBgn0002521
0.809 0.945
phol
M06144_2.00
Drosophila melanogaster
CGCCATHTTK

MAADATGGCG
B1H
Zhu et al.(2011)
phol_SANGER_5_FBgn0035997
0.767 0.835
phol
M06145_2.00
Drosophila melanogaster
NKNCGCCATNTTKNN

NNMAANATGGCGNMN
B1H
Zhu et al.(2011)
phol_SOLEXA_5_FBgn0035997
0.767 0.835
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000021692 C2H2 ZF 297 320
ENSMUSP00000021692 C2H2 ZF 325 347
ENSMUSP00000021692 C2H2 ZF 353 377
ENSMUSP00000021692 C2H2 ZF 383 407

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAL89720 Xenopus laevis AAL89720 N 0.000
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N 0.000
Alligator_sinensis_CCG004678.1 Alligator sinensis Alligator_sinensis_CCG004678.1 N 0.000
Cmyd_10017930 Chelonia mydas Cmyd_10017930 N 0.000
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N 0.000
cers4b Danio rerio ENSDARG00000018619 N 0.000
cers3b Danio rerio ENSDARG00000036337 N 0.000
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N 0.000
ENSGMOG00000018099 Gadus morhua ENSGMOG00000018099 N 0.000
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N 0.000
ENSMGAG00000017003 Meleagris gallopavo ENSMGAG00000017003 N 0.000
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N 0.000
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N 0.000
ENSMODG00000004533 Monodelphis domestica ENSMODG00000004533 N 0.000
ENSOARG00000017904 Ovis aries ENSOARG00000017904 N 0.000
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N 0.000
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N 0.000
CERS5 Oryzias latipes ENSORLG00000010219 N 0.000
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N 0.000
ENSPMAG00000008848 Petromyzon marinus ENSPMAG00000008848 N 0.000
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N 0.000
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N 0.000
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N 0.000
cers2a Tetraodon nigroviridis ENSTNIG00000017545 N 0.000
CERS5 Tetraodon nigroviridis ENSTNIG00000017897 N 0.000
cers4b Takifugu rubripes ENSTRUG00000000191 N 0.000
CERS5 Takifugu rubripes ENSTRUG00000010435 N 0.000
cers2a Takifugu rubripes ENSTRUG00000012292 N 0.000
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N 0.000
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N 0.000
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N 0.000
LotgiG226091 Lottia gigantea LotgiG226091 N 0.000
Myotis_brandtii_Lass6_10034918 Myotis brandtii Myotis_brandtii_Lass6_10034918 N 0.000
cers3.L Xenopus laevis XB-GENE-6251639 N 0.000
cers5.S Xenopus laevis XB-GENE-866438 N 0.000