CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zbtb48
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000028952
T101079_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; identical protein binding activity; and sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription, DNA-templated; regulation of transcription by RNA polymerase II; and telomere maintenance via telomere lengthening. Predicted to be located in chromosome, telomeric region. Predicted to be active in nucleus. Is expressed in early conceptus and genitourinary system. Orthologous to human ZBTB48 (zinc finger and BTB domain containing 48). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZBTB48
M08391_2.00
Homo sapiens
HHDNTCCCTDR
YHAGGGANHDD
ChIP-seq
Schmitges et al.(2016)
P10074.MEME
0.813
0.991
ZBTB48
M08956_2.00
Homo sapiens
BHBRVTCCCTDR
YHAGGGABYVDV
Misc
Kulakovskiy et al.(2013)
ZBT48_HUMAN.H11MO.0.C
0.813
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000067521
C2H2 ZF
284
306
VECPTCHKKFLSKYYLKVHNRKH
ENSMUSP00000067521
C2H2 ZF
312
333
FECPKCGKCYFRKENLLEHEAR
ENSMUSP00000067521
C2H2 ZF
343
365
FTCSVCQETFRRRMELRLHMVSH
ENSMUSP00000067521
C2H2 ZF
371
394
YKCSSCSQQFMQKKDLQSHMIKLH
ENSMUSP00000067521
C2H2 ZF
429
452
FVCEECGHRASSRNGLQMHIKAKH
ENSMUSP00000067521
C2H2 ZF
458
480
YVCEFCSHAFTQKANLNMHLRTH
ENSMUSP00000067521
C2H2 ZF
486
508
FQCHLCGKTFRTQASLDKHNRTH
ENSMUSP00000067521
C2H2 ZF
514
537
FSCEFCEQRFTEKGPLLRHVASRH
ENSMUSP00000067521
C2H2 ZF
543
565
HFCQICGKTFKAVEQLRVHVRRH
ENSMUSP00000067521
C2H2 ZF
571
593
FECTECGYKFTRQAHLRRHMEIH
ENSMUSP00000114726
C2H2 ZF
284
306
VECPTCHKKFLSKYYLKVHNRKH
ENSMUSP00000114726
C2H2 ZF
312
333
FECPKCGKCYFRKENLLEHEAR
ENSMUSP00000114726
C2H2 ZF
343
365
FTCSVCQETFRRRMELRLHMVSH
ENSMUSP00000114726
C2H2 ZF
371
394
YKCSSCSQQFMQKKDLQSHMIKLH
ENSMUSP00000117079
C2H2 ZF
80
102
VECPTCHKKFLSKYYLKVHNRKH
ENSMUSP00000117079
C2H2 ZF
108
129
FECPKCGKCYFRKENLLEHEAR
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy